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1eud

CRYSTAL STRUCTURE OF PHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE

Method: X-RAY DIFFRACTION D_max: 92.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1eud
deposition_date	2000-04-14
title	CRYSTAL STRUCTURE OF PHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE
keywords	LIGASE, GTP-SPECIFIC, PHOSPHONOHISTIDINE; LIGASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	28.25 Å
rg_electron	27.55 Å
i0	90726100.00
molecular_weight	75078.0 kDa
excluded_volume	94192 Å³
envelope_volume	113960 Å³
shell_volume	34535 Å³
envelope_diameter	97.1 Å
shell_rg	34.81 Å
envelope_rg	27.50 Å
shape_rg	27.56 Å
total_rg	28.22 Å
total_atoms	5262
n_residues	698
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	92.1 Å
rg_real	28.18 Å
rg_real_error	0.49 Å
i0_real	9.0730e+07
i0_real_error	1.3310e+06
rg_reciprocal	28.21 Å
i0_reciprocal	90730000.0000
total_estimate	0.8990
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	32.9 Å
skewness	0.270
kurtosis	-0.467
angular_range	— – 0.2800 Å⁻¹
current_alpha	0.0001
highest_alpha	19900000.0000
n_real_points	57
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.900; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.995; Smooth: 0.988

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	SUCCINYL-COA SYNTHETASE, ALPHA CHAIN
formula_weight	32882.7 kDa
ec_number	6.2.1.4
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	5451

MAIRHCSYTASRKHLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKML

Source

organism	Sus scrofa
common_name	pig
ncbi_taxonomy_id	9823
host_organism	Escherichia coli

Entity 2 polymer

description	SUCCINYL-COA SYNTHETASE, BETA CHAIN
formula_weight	42843.1 kDa
ec_number	6.2.1.4
mutation	L23V
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B

MVNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASVTKK

Source

organism	Sus scrofa
common_name	pig
ncbi_taxonomy_id	9823
host_organism	Escherichia coli

Entity 3 non-polymer

description	SULFATE ION
formula_weight	96.1 kDa
src_method	syn
entity_count	2

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	188

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6. Citations (1)

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length_a	86.907 Å
length_b	82.278 Å
length_c	50.017 Å
angle_alpha	90.00 °
angle_beta	104.37 °
angle_gamma	90.00 °
z_pdb	2

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	2.100 Å
resolution_low	41.000 Å
r_factor	0.1620
r_work	0.1560
r_free	0.2150

fit	/app/data/saxs_computation/eu/1eud/1eud.fit
pddf	/app/data/pr_computation/eu/1eud/1eud.pr.out
profile	/app/data/saxs_computation/eu/1eud/1eud.dat

CRYSTAL STRUCTURE OF PHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

5. Entities & Polymer Info (4)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 non-polymer

Entity 4 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)