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1gcc

SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE

Method: SOLUTION NMR
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1. Protein Identity and Related Structures Protein Identity & Related Structures

ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1

Arabidopsis thaliana

UniProt O80337

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Monomer Protein 1 DNA 2 ;DNA (5'-D(*TP*AP*GP*CP*CP*GP*CP*CP*AP*GP*C)-3') ; × 1 ;DNA (5'-D(*GP*CP*TP*GP*GP*CP*GP*GP*CP*TP*A)-3') ; × 1 Consistent with all polymers

Other States of the Same Protein in the Database

Monomer
2gcc 3gcc

2 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1gcc

1 assemblies

View Construct and Data Evidence
UniProt name ERF1A_ARATH
Isoform —
PDB entities 3
Chains and sequence ranges Author chain A； PDBConstruct 1–63； UniProt 144–206

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1gcc
Deposition date deposition_date1998-03-13
Structure title titleSOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE
Keywords keywordsTRANSCRIPTION FACTOR, PROTEIN-DNA COMPLEX, ETHYLENE INDUCIBLE, COMPLEX (TRANSCRIPTION FACTOR-DNA), TRANSCRIPTION-DNA COMPLEX; TRANSCRIPTION/DNA
Experimental Method methodSOLUTION NMR
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1gcc__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1gcc__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1gcc__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）14.75 Å
Rg (electron density)14.00 Å
Total Rg15.06 Å
Atom count1719
Residues85
Excluded volume15502 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1gcc__assembly_1__model_1 trimeric （3） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1gcca_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.10 — DNA-binding domain
Superfamily Superfamily superfamilyd.10.1 — DNA-binding domain
Family Family familyd.10.1.2 — GCC-box binding domain

CATH v4.4 (1 domains)

Domain ID domain_id1gccA00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology730 — GCC-box Binding Domain
Homologous superfamily homologous superfamily10 — AP2/ERF domain
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7. Citations (1)