1gs4

Structural basis for the glucocorticoid response in a mutant human androgen receptor (ARccr) derived from an androgen-independent prostate cancer

Method: X-RAY DIFFRACTION Dmax: 60.6 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

ANDROGEN RECEPTOR

HOMO SAPIENS

UniProt P10275

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein monomer Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 670–917 Fragment:LIGAND-BINDING DOMAIN, RESIDUES 670-917 Mutation:YES ZK5 9ALPHA-FLUOROCORTISOL × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION X-ray crystallization conditions:pH 7.2;pH 7.20 Resolution 1.95 Å R-free 0.285

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

94 other PDB entries and 96 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ANDR_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–248; UniProt 670–917

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1gs4

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1gs4
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1gs4
Deposition date deposition_date2001-12-27
Structure title titleStructural basis for the glucocorticoid response in a mutant human androgen receptor (ARccr) derived from an androgen-independent prostate cancer
Keywords keywordsANDROGEN RECEPTOR, HUMAN ANDROGEN RECEPTOR, LIGAND-BINDING DOMAIN, CORTISOL/ CORTISONE RESPONSE, PROSTATE CANCER; ANDROGEN RECEPTOR
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier19.26
Radius of gyration Rg (electron density) rg_electron17.85
Forward intensity I(0) i013731700.00
Molecular weight molecular_weight28840.0 kDa
Excluded volume excluded_volume36525 ų
Envelope volume envelope_volume40464 ų
Hydration-shell volume shell_volume18810 ų
Envelope diameter envelope_diameter63.7
Shell Rg shell_rg24.32
Envelope Rg envelope_rg18.17
Shape Rg shape_rg17.83
Total Rg total_rg18.92
Total atoms total_atoms2025
Residues n_residues244
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax60.6
Rg (real space) rg_real19.16
Rg uncertainty (real space) rg_real_error0.44
I(0) (real space) i0_real1.3730e+07
I(0) uncertainty (real space) i0_real_error2.1190e+05
Rg (reciprocal space) rg_reciprocal19.18
I(0) (reciprocal space) i0_reciprocal13730000.0000
Solution quality estimate total_estimate0.8182
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary24.4
Skewness Skewness skewness0.201
Kurtosis Kurtosis kurtosis-0.384
Angular range angular_range— – 0.4150 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha3242000.0000
Real-space data points n_real_points73
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.880; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (4)

7. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1gs4a_
Class classa — All alpha proteins
Fold Fold folda.123 — Nuclear receptor ligand-binding domain
Superfamily Superfamily superfamilya.123.1 — Nuclear receptor ligand-binding domain
Family Family familya.123.1.1 — Nuclear receptor ligand-binding domain

CATH v4.4 (1 domains)

Domain ID domain_id1gs4A00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology565 — Retinoid X Receptor
Homologous superfamily homologous superfamily10 — Retinoid X Receptor

8. Citations (1)

9. Files and Curves (10)