SAXSdb — 1t7h

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1. Protein Identity and Related Structures Protein Identity & Related Structures

Endothelin-1

Homo sapiens

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein homooligomer	Homooligomer	Protein 2	water × 2	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	EDN1_HUMAN
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 1–18； UniProt 51–68 Author chain B； PDBConstruct 1–18； UniProt 51–68

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	1t7h
Deposition date deposition_date	2004-05-10
Structure title title	X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide
Keywords keywords	endothelin, dimer, salt bridge, cysteine stabilized helical motif, SIGNALING PROTEIN; SIGNALING PROTEIN
Experimental Method method	X-RAY DIFFRACTION

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1t7h__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1t7h__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

1t7h__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	9.93 Å
Rg (electron density)	9.11 Å
Total Rg	10.61 Å
Atom count	290
Residues	36
Excluded volume	5150 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`1t7h__assembly_1__model_1`	dimeric （2）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (2 domains)

Domain ID domain_id	d1t7ha_
Class class	j — Peptides
Fold Fold fold	j.28 — Endothelin-like
Superfamily Superfamily superfamily	j.28.1 — Endothelin-like
Family Family family	j.28.1.1 — Endothelin-like

Domain ID domain_id	d1t7hb_
Class class	j — Peptides
Fold Fold fold	j.28 — Endothelin-like
Superfamily Superfamily superfamily	j.28.1 — Endothelin-like
Family Family family	j.28.1.1 — Endothelin-like

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Unit-cell length a length_a	30.136 Å
Unit-cell length b length_b	53.926 Å
Unit-cell length c length_c	19.486 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	8

Space group space_group	P 21 21 2
Space-group number int_tables_number	18
Crystal system crystal_system	—

Resolution resolution	1.130 Å
Low-resolution limit resolution_low	10.000 Å
R factor r_factor	0.1220
R_work r_work	0.1200
R_free r_free	0.1340

Description description	Endothelin-1
Molecular weight formula_weight	2143.6 kDa
Source method src_method	man
Copy count entity_count	2

Polymer type type	polypeptide(L)
Chain IDs strand_id	A,B
Atom count atom_count	365

X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide

1. Protein Identity and Related Structures Protein Identity & Related Structures

Endothelin-1

State in the Current Structure

Other States of the Same Protein in the Database

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

1t7h__assembly_1__model_1

1t7h__assembly_1__model_1 | I(q)

1t7h__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

Refinement Refinement

Diffraction experiment Diffraction

5. Entities and Polymers Entities & Polymers (2)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

Entity 2 Entity 2 water

6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (2 domains)

7. Citations (1)

Source organism organism	Homo sapiens
Common name common_name	human
NCBI taxonomy ID ncbi_taxonomy_id	9606

Description description	water
Molecular weight formula_weight	18.0 kDa
Source method src_method	nat
Copy count entity_count	58

X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide

1. Protein Identity and Related Structures Protein Identity & Related Structures

Endothelin-1

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

1t7h__assembly_1__model_1

1t7h__assembly_1__model_1 | I(q)

1t7h__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

Refinement Refinement

Diffraction experiment Diffraction

5. Entities and Polymers Entities & Polymers (2)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

Entity 2 Entity 2 water

6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (2 domains)

7. Citations (1)