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2c9g

THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

PENTON PROTEIN

HUMAN ADENOVIRUS 2

UniProt P03276

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 60 No other associated polymer Consistent with protein count
2 Protein monomer Monomer Protein 1 No other associated polymer Consistent with protein count
3 Protein homooligomer Homooligomer Protein 5 No other associated polymer Consistent with protein count
4 Protein homooligomer Homooligomer Protein 6 No other associated polymer Consistent with protein count
5 Protein monomer Monomer Protein 1 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1x9p 1x9p 2c9g 2c9g

4 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers
1x9p 1x9p 1x9p 1x9p 2c6s 2c9g 2c9g 2c9g

8 assemblies

Heteromeric or nucleic-acid complex
1x9t 1x9t 1x9t 1x9t 1x9t 1x9t 2c9f 2c9f 2c9f 2c9f 2c9f 4v4u

14 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name PEN3_ADE02
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–523； UniProt 49–571 Author chain B； PDBConstruct 1–523； UniProt 49–571 Author chain C； PDBConstruct 1–523； UniProt 49–571 Author chain D； PDBConstruct 1–523； UniProt 49–571 Author chain E； PDBConstruct 1–523； UniProt 49–571

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2c9g
Deposition date deposition_date2005-12-12
Structure title titleTHE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON
Keywords keywordsVIRUS-VIRAL PROTEIN COMPLEX, DODECAHEDRON, PENTON, FIBRE, LATE PROTEIN; VIRUS/VIRAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2c9g__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2c9g__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2c9g__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）96.61 Å
Rg (electron density)96.23 Å
Total Rg96.36 Å
Atom count214080
Residues26880
Excluded volume3789900 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2c9g__assembly_1__model_1 60-MERIC （60） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2c9g__assembly_2__model_1 monomeric （1） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 2c9g__assembly_3__model_1 pentameric （5） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 2c9g__assembly_4__model_1 hexameric （6） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 2c9g__assembly_5__model_1 monomeric （1） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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7. Citations (1)