Escherichia coli K-12
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 2 | PYRIDOXAL-5'-PHOSPHATE × 2 | Consistent with protein count |
| UniProt name | GLYA_ECOLI |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–417； UniProt 1–417 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3g8m |
| Deposition date deposition_date | 2009-02-12 |
| Structure title title | Serine Hydroxymethyltransferase Y55F Mutant |
| Keywords keywords | SHMT, E. coli, Y55F, One-carbon metabolism, Pyridoxal phosphate, Transferase; TRANSFERASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 28.67 Å |
| Rg (electron density) | 27.80 Å |
| Total Rg | 28.63 Å |
| Atom count | 6400 |
| Residues | 834 |
| Excluded volume | 113730 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | 3g8mA01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 640 — Aspartate Aminotransferase; domain 2 |
| Homologous superfamily homologous superfamily | 10 — Type I PLP-dependent aspartate aminotransferase-like (Major domain) |
| Domain ID domain_id | 3g8mA02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 90 — Alpha-Beta Complex |
| Topology topology | 1150 — Aspartate Aminotransferase, domain 1 |
| Homologous superfamily homologous superfamily | 10 — Aspartate Aminotransferase, domain 1 |