Human immunodeficiency virus 1
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 5 | IODIDE ION × 10 | 与蛋白数一致 |
| UniProt名称 | Q72497_9HIV1 |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–231； UniProt 133–363 作者链 B； PDB构建体 1–231； UniProt 133–363 作者链 C； PDB构建体 1–231； UniProt 133–363 作者链 D； PDB构建体 1–231； UniProt 133–363 作者链 E； PDB构建体 1–231； UniProt 133–363 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 3p05 |
| 沉积日期 deposition_date | 2010-09-27 |
| 结构标题 title | X-ray structure of pentameric HIV-1 CA |
| 关键词 keywords | capsid protein, VIRAL PROTEIN; VIRAL PROTEIN |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 33.13 Å |
| Rg（电子密度） | 32.12 Å |
| 总 Rg | 32.60 Å |
| 原子数 | 7918 |
| 残基数 | 1033 |
| 排除体积 | 141160 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d3p05a1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.73 — Retrovirus capsid protein, N-terminal core domain |
| 超家族 Superfamily superfamily | a.73.1 — Retrovirus capsid protein, N-terminal core domain |
| 家族 Family family | a.73.1.1 — Retrovirus capsid protein, N-terminal core domain |
| 结构域编号 domain_id | d3p05a2 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.28 — Acyl carrier protein-like |
| 超家族 Superfamily superfamily | a.28.3 — Retrovirus capsid dimerization domain-like |
| 家族 Family family | a.28.3.0 — automated matches |
| 结构域编号 domain_id | d3p05b1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.73 — Retrovirus capsid protein, N-terminal core domain |
| 超家族 Superfamily superfamily | a.73.1 — Retrovirus capsid protein, N-terminal core domain |
| 家族 Family family | a.73.1.1 — Retrovirus capsid protein, N-terminal core domain |
| 结构域编号 domain_id | d3p05b2 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.28 — Acyl carrier protein-like |
| 超家族 Superfamily superfamily | a.28.3 — Retrovirus capsid dimerization domain-like |
| 家族 Family family | a.28.3.0 — automated matches |
| 结构域编号 domain_id | d3p05c1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.73 — Retrovirus capsid protein, N-terminal core domain |
| 超家族 Superfamily superfamily | a.73.1 — Retrovirus capsid protein, N-terminal core domain |
| 家族 Family family | a.73.1.1 — Retrovirus capsid protein, N-terminal core domain |
| 结构域编号 domain_id | d3p05c2 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.28 — Acyl carrier protein-like |
| 超家族 Superfamily superfamily | a.28.3 — Retrovirus capsid dimerization domain-like |
| 家族 Family family | a.28.3.0 — automated matches |
| 结构域编号 domain_id | d3p05d1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.73 — Retrovirus capsid protein, N-terminal core domain |
| 超家族 Superfamily superfamily | a.73.1 — Retrovirus capsid protein, N-terminal core domain |
| 家族 Family family | a.73.1.1 — Retrovirus capsid protein, N-terminal core domain |
| 结构域编号 domain_id | d3p05e1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.73 — Retrovirus capsid protein, N-terminal core domain |
| 超家族 Superfamily superfamily | a.73.1 — Retrovirus capsid protein, N-terminal core domain |
| 家族 Family family | a.73.1.1 — Retrovirus capsid protein, N-terminal core domain |
| 结构域编号 domain_id | d3p05e2 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.28 — Acyl carrier protein-like |
| 超家族 Superfamily superfamily | a.28.3 — Retrovirus capsid dimerization domain-like |
| 家族 Family family | a.28.3.0 — automated matches |
| 结构域编号 domain_id | 3p05A01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 375 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 结构域编号 domain_id | 3p05A02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |
| 结构域编号 domain_id | 3p05B01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 375 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 结构域编号 domain_id | 3p05B02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |
| 结构域编号 domain_id | 3p05C01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 375 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 结构域编号 domain_id | 3p05C02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |
| 结构域编号 domain_id | 3p05D01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 375 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 结构域编号 domain_id | 3p05D02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |
| 结构域编号 domain_id | 3p05E01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 375 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Human Immunodeficiency Virus Type 1 Capsid Protein |
| 结构域编号 domain_id | 3p05E02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |