4v82

Crystal structure of cyanobacterial Photosystem II in complex with terbutryn

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Photosystem Q(B) protein 1

OrganismNot specified

UniProt P0A444

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBA1_THEEB
Isoform —
PDB entities 1
Chains and sequence ranges Author chain AA; PDBConstruct 1–344; UniProt 1–344 Author chain BA; PDBConstruct 1–344; UniProt 1–344

Photosystem II core light harvesting protein

OrganismNot specified

UniProt Q8DIQ1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8DIQ1_THEEB
Isoform —
PDB entities 2
Chains and sequence ranges Author chain AB; PDBConstruct 1–510; UniProt 1–510 Author chain BB; PDBConstruct 1–510; UniProt 1–510

Photosystem II CP43 protein

OrganismNot specified

UniProt Q8DIF8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8DIF8_THEEB
Isoform —
PDB entities 3
Chains and sequence ranges Author chain AC; PDBConstruct 1–461; UniProt 1–461 Author chain BC; PDBConstruct 1–461; UniProt 1–461

Photosystem II D2 protein

OrganismNot specified

UniProt Q8CM25

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBD_THEEB
Isoform —
PDB entities 4
Chains and sequence ranges Author chain AD; PDBConstruct 1–352; UniProt 1–352 Author chain BD; PDBConstruct 1–352; UniProt 1–352

Cytochrome b559 subunit alpha

OrganismNot specified

UniProt Q8DIP0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBE_THEEB
Isoform —
PDB entities 5
Chains and sequence ranges Author chain AE; PDBConstruct 1–84; UniProt 1–84 Author chain BE; PDBConstruct 1–84; UniProt 1–84

Cytochrome b559 subunit beta

OrganismNot specified

UniProt Q8DIN9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBF_THEEB
Isoform —
PDB entities 6
Chains and sequence ranges Author chain AF; PDBConstruct 1–45; UniProt 1–45 Author chain BF; PDBConstruct 1–45; UniProt 1–45

Photosystem II reaction center protein H

OrganismNot specified

UniProt Q8DJ43

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBH_THEEB
Isoform —
PDB entities 7
Chains and sequence ranges Author chain AH; PDBConstruct 1–66; UniProt 1–66 Author chain BH; PDBConstruct 1–66; UniProt 1–66

Photosystem II reaction center protein I

OrganismNot specified

UniProt Q8DJZ6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBI_THEEB
Isoform —
PDB entities 8
Chains and sequence ranges Author chain AI; PDBConstruct 1–38; UniProt 1–38 Author chain BI; PDBConstruct 1–38; UniProt 1–38

Photosystem II reaction center protein J

OrganismNot specified

UniProt P59087

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBJ_THEEB
Isoform —
PDB entities 9
Chains and sequence ranges Author chain AJ; PDBConstruct 1–40; UniProt 1–40 Author chain BJ; PDBConstruct 1–40; UniProt 1–40

Photosystem II reaction center protein K

OrganismNot specified

UniProt Q9F1K9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBK_THEEB
Isoform —
PDB entities 10
Chains and sequence ranges Author chain AK; PDBConstruct 1–37; UniProt 10–46 Author chain BK; PDBConstruct 1–37; UniProt 10–46

Photosystem II reaction center protein L

OrganismNot specified

UniProt Q8DIN8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBL_THEEB
Isoform —
PDB entities 11
Chains and sequence ranges Author chain AL; PDBConstruct 1–37; UniProt 1–37 Author chain BL; PDBConstruct 1–37; UniProt 1–37

Photosystem II reaction center protein M

OrganismNot specified

UniProt Q8DHA7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBM_THEEB
Isoform —
PDB entities 12
Chains and sequence ranges Author chain AM; PDBConstruct 1–36; UniProt 1–36 Author chain BM; PDBConstruct 1–36; UniProt 1–36

Photosystem II manganese-stabilizing polypeptide

OrganismNot specified

UniProt P0A431

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBO_THEEB
Isoform —
PDB entities 13
Chains and sequence ranges Author chain AO; PDBConstruct 1–247; UniProt 26–272 Author chain BO; PDBConstruct 1–247; UniProt 26–272

Photosystem II reaction center protein T

OrganismNot specified

UniProt Q8DIQ0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBT_THEEB
Isoform —
PDB entities 14
Chains and sequence ranges Author chain AT; PDBConstruct 1–32; UniProt 1–32 Author chain BT; PDBConstruct 1–32; UniProt 1–32

Photosystem II 12 kDa extrinsic protein

OrganismNot specified

UniProt Q9F1L5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBU_THEEB
Isoform —
PDB entities 15
Chains and sequence ranges Author chain AU; PDBConstruct 1–104; UniProt 31–134 Author chain BU; PDBConstruct 1–104; UniProt 31–134

Cytochrome c-550

OrganismNot specified

UniProt P0A386

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CY550_THEEB
Isoform —
PDB entities 16
Chains and sequence ranges Author chain AV; PDBConstruct 1–137; UniProt 27–163 Author chain BV; PDBConstruct 1–137; UniProt 27–163

Photosystem II reaction center protein ycf12

OrganismNot specified

UniProt Q8DJI1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name YCF12_THEEB
Isoform —
PDB entities 17
Chains and sequence ranges Author chain Ay; PDBConstruct 1–46; UniProt 1–46 Author chain By; PDBConstruct 1–46; UniProt 1–46

Photosystem II reaction center X protein

OrganismNot specified

UniProt Q9F1R6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) PHOTOSYSTEM II PSBX PROTEIN × 2 Photosystem II reaction center protein Z × 2 (Q8DHJ2) FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBX_THEEB
Isoform —
PDB entities 18
Chains and sequence ranges Author chain AX; PDBConstruct 1–41; UniProt 1–41 Author chain BX; PDBConstruct 1–41; UniProt 1–41

Photosystem II reaction center protein Z

OrganismNot specified

UniProt Q8DHJ2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 40 Photosystem Q(B) protein 1 × 2 (P0A444) Photosystem II core light harvesting protein × 2 (Q8DIQ1) Photosystem II CP43 protein × 2 (Q8DIF8) Photosystem II D2 protein × 2 (Q8CM25) Cytochrome b559 subunit alpha × 2 (Q8DIP0) Cytochrome b559 subunit beta × 2 (Q8DIN9) Photosystem II reaction center protein H × 2 (Q8DJ43) Photosystem II reaction center protein I × 2 (Q8DJZ6) Photosystem II reaction center protein J × 2 (P59087) Photosystem II reaction center protein K × 2 (Q9F1K9) Photosystem II reaction center protein L × 2 (Q8DIN8) Photosystem II reaction center protein M × 2 (Q8DHA7) Photosystem II manganese-stabilizing polypeptide × 2 (P0A431) Photosystem II reaction center protein T × 2 (Q8DIQ0) Photosystem II 12 kDa extrinsic protein × 2 (Q9F1L5) Cytochrome c-550 × 2 (P0A386) Photosystem II reaction center protein ycf12 × 2 (Q8DJI1) Photosystem II reaction center X protein × 2 (Q9F1R6) PHOTOSYSTEM II PSBX PROTEIN × 2 FE (II) ION × 2 BICARBONATE ION × 2 CHLORIDE ION × 2 CHLOROPHYLL A × 70 2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE × 2 OXYGEN EVOLVING SYSTEM × 2 BETA-CAROTENE × 24 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 14 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 22 DODECYL-BETA-D-MALTOSIDE × 16 DIMETHYL SULFOXIDE × 8 PHEOPHYTIN A × 4 ;2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE ; × 2 PROTOPORPHYRIN IX CONTAINING FE × 4 CALCIUM ION × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSBZ_THEEB
Isoform —
PDB entities 20
Chains and sequence ranges Author chain AZ; PDBConstruct 1–62; UniProt 1–62 Author chain BZ; PDBConstruct 1–62; UniProt 1–62

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id4v82
Deposition date deposition_date2010-11-30
Structure title titleCrystal structure of cyanobacterial Photosystem II in complex with terbutryn
Keywords keywords;TRANSMEMBRANE ALPHA-HELIX, PS II, PS2, ELECTRON TRANSPORT PHOTOSYSTEM, HERBICIDE RESISTANCE, PHOTOSYNTHESIS, PHOTOSYSTEM II, REACTION CENTER, IRON, METAL-BINDING, HEME, MANGANESE, MEMBRANE COMPLEX, THYLAKOID ;; PHOTOSYNTHESIS
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

4v82__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

4v82__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

4v82__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)57.15 Å
Rg (electron density)56.49 Å
Total Rg56.73 Å
Atom count50264
Residues5280
Excluded volume935160 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 4v82__assembly_1__model_1 40-meric (40) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (37)

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7. Citations (1)