5b1b

Bovine heart cytochrome c oxidase in the fully reduced state at 1.6 angstrom resolution

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Cytochrome c oxidase subunit 1

OrganismNot specified

UniProt P00396

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX1_BOVIN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–514; UniProt 1–514 Author chain N; PDBConstruct 1–514; UniProt 1–514

Cytochrome c oxidase subunit 2

OrganismNot specified

UniProt P68530

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX2_BOVIN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–227; UniProt 1–227 Author chain O; PDBConstruct 1–227; UniProt 1–227

Cytochrome c oxidase subunit 3

OrganismNot specified

UniProt P00415

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX3_BOVIN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–259; UniProt 3–261 Author chain P; PDBConstruct 1–259; UniProt 3–261

Cytochrome c oxidase subunit 4 isoform 1, mitochondrial

OrganismNot specified

UniProt P00423

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX41_BOVIN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–144; UniProt 26–169 Author chain Q; PDBConstruct 1–144; UniProt 26–169

Cytochrome c oxidase subunit 5A, mitochondrial

OrganismNot specified

UniProt P00426

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX5A_BOVIN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–105; UniProt 48–152 Author chain R; PDBConstruct 1–105; UniProt 48–152

Cytochrome c oxidase subunit 5B, mitochondrial

OrganismNot specified

UniProt P00428

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX5B_BOVIN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–98; UniProt 32–129 Author chain S; PDBConstruct 1–98; UniProt 32–129

Cytochrome c oxidase subunit 6A2, mitochondrial

OrganismNot specified

UniProt P07471

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CX6A2_BOVIN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–84; UniProt 13–96 Author chain T; PDBConstruct 1–84; UniProt 13–96

Cytochrome c oxidase subunit 6B1

OrganismNot specified

UniProt P00429

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CX6B1_BOVIN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–79; UniProt 8–86 Author chain U; PDBConstruct 1–79; UniProt 8–86

Cytochrome c oxidase subunit 6C

OrganismNot specified

UniProt P04038

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX6C_BOVIN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain I; PDBConstruct 1–73; UniProt 2–74 Author chain V; PDBConstruct 1–73; UniProt 2–74

Cytochrome c oxidase subunit 7A1, mitochondrial

OrganismNot specified

UniProt P07470

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CX7A1_BOVIN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 1–58; UniProt 22–79 Author chain W; PDBConstruct 1–58; UniProt 22–79

Cytochrome c oxidase subunit 7B, mitochondrial

OrganismNot specified

UniProt P13183

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX7B_BOVIN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–49; UniProt 30–78 Author chain X; PDBConstruct 1–49; UniProt 30–78

Cytochrome c oxidase subunit 7C, mitochondrial

OrganismNot specified

UniProt P00430

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 8B, mitochondrial × 1 (P10175) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX7C_BOVIN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain L; PDBConstruct 1–46; UniProt 18–63 Author chain Y; PDBConstruct 1–46; UniProt 18–63

Cytochrome c oxidase subunit 8B, mitochondrial

OrganismNot specified

UniProt P10175

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 29 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 4 DECYL-BETA-D-MALTOPYRANOSIDE × 13 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Cytochrome c oxidase subunit 1 × 1 (P00396) Cytochrome c oxidase subunit 2 × 1 (P68530) Cytochrome c oxidase subunit 3 × 1 (P00415) Cytochrome c oxidase subunit 4 isoform 1, mitochondrial × 1 (P00423) Cytochrome c oxidase subunit 5A, mitochondrial × 1 (P00426) Cytochrome c oxidase subunit 5B, mitochondrial × 1 (P00428) Cytochrome c oxidase subunit 6A2, mitochondrial × 1 (P07471) Cytochrome c oxidase subunit 6B1 × 1 (P00429) Cytochrome c oxidase subunit 6C × 1 (P04038) Cytochrome c oxidase subunit 7A1, mitochondrial × 1 (P07470) Cytochrome c oxidase subunit 7B, mitochondrial × 1 (P13183) Cytochrome c oxidase subunit 7C, mitochondrial × 1 (P00430) HEME-A × 2 COPPER (II) ION × 1 MAGNESIUM ION × 1 SODIUM ION × 1 (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE × 4 TRISTEAROYLGLYCEROL × 3 (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE × 1 1,2-ETHANEDIOL × 33 DINUCLEAR COPPER ION × 1 CHOLIC ACID × 2 DECYL-BETA-D-MALTOPYRANOSIDE × 10 CARDIOLIPIN × 2 (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE × 3 ZINC ION × 1 PHOSPHATE ION × 1 water × 13 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX8B_BOVIN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain M; PDBConstruct 1–43; UniProt 25–67 Author chain Z; PDBConstruct 1–43; UniProt 25–67

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5b1b
Deposition date deposition_date2015-12-01
Structure title titleBovine heart cytochrome c oxidase in the fully reduced state at 1.6 angstrom resolution
Keywords keywordsOxidoreductase, respiratory chain, Proton pump, Heme; OXIDOREDUCTASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5b1b__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5b1b__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5b1b__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)39.08 Å
Rg (electron density)37.80 Å
Total Rg38.33 Å
Atom count15420
Residues1776
Excluded volume283820 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5b1b__assembly_1__model_1 tridecameric (13) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 5b1b__assembly_2__model_1 tridecameric (13) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (29)

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6. Fold Classification (SCOP + CATH) 58 domains

SCOP 2.08 (28 domains)

Domain ID domain_idd5b1ba_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.24 — Cytochrome c oxidase subunit I-like
Superfamily Superfamily superfamilyf.24.1 — Cytochrome c oxidase subunit I-like
Family Family familyf.24.1.1 — Cytochrome c oxidase subunit I-like
Domain ID domain_idd5b1bb1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.17 — Transmembrane helix hairpin
Superfamily Superfamily superfamilyf.17.2 — Cytochrome c oxidase subunit II-like, transmembrane region
Family Family familyf.17.2.1 — Cytochrome c oxidase subunit II-like, transmembrane region
Domain ID domain_idd5b1bb2
Class classb — All beta proteins
Fold Fold foldb.6 — Cupredoxin-like
Superfamily Superfamily superfamilyb.6.1 — Cupredoxins
Family Family familyb.6.1.2 — Periplasmic domain of cytochrome c oxidase subunit II
Domain ID domain_idd5b1bc_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.25 — Cytochrome c oxidase subunit III-like
Superfamily Superfamily superfamilyf.25.1 — Cytochrome c oxidase subunit III-like
Family Family familyf.25.1.1 — Cytochrome c oxidase subunit III-like
Domain ID domain_idd5b1bd_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.1 — Mitochondrial cytochrome c oxidase subunit IV
Family Family familyf.23.1.1 — Mitochondrial cytochrome c oxidase subunit IV
Domain ID domain_idd5b1be_
Class classa — All alpha proteins
Fold Fold folda.118 — alpha-alpha superhelix
Superfamily Superfamily superfamilya.118.11 — Cytochrome c oxidase subunit E
Family Family familya.118.11.1 — Cytochrome c oxidase subunit E
Domain ID domain_idd5b1bf_
Class classg — Small proteins
Fold Fold foldg.41 — Rubredoxin-like
Superfamily Superfamily superfamilyg.41.5 — Rubredoxin-like
Family Family familyg.41.5.3 — Cytochrome c oxidase Subunit F
Domain ID domain_idd5b1bg_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.2 — Mitochondrial cytochrome c oxidase subunit VIa
Family Family familyf.23.2.1 — Mitochondrial cytochrome c oxidase subunit VIa
Domain ID domain_idd5b1bh_
Class classa — All alpha proteins
Fold Fold folda.51 — Cytochrome c oxidase subunit h
Superfamily Superfamily superfamilya.51.1 — Cytochrome c oxidase subunit h
Family Family familya.51.1.1 — Cytochrome c oxidase subunit h
Domain ID domain_idd5b1bi_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.3 — Mitochondrial cytochrome c oxidase subunit VIc
Family Family familyf.23.3.1 — Mitochondrial cytochrome c oxidase subunit VIc
Domain ID domain_idd5b1bj_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.4 — Mitochondrial cytochrome c oxidase subunit VIIa
Family Family familyf.23.4.1 — Mitochondrial cytochrome c oxidase subunit VIIa
Domain ID domain_idd5b1bk_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.5 — Mitochondrial cytochrome c oxidase subunit VIIb
Family Family familyf.23.5.1 — Mitochondrial cytochrome c oxidase subunit VIIb
Domain ID domain_idd5b1bl_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.6 — Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family Family familyf.23.6.1 — Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Domain ID domain_idd5b1bm_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.7 — Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family Family familyf.23.7.1 — Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Domain ID domain_idd5b1bn_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.24 — Cytochrome c oxidase subunit I-like
Superfamily Superfamily superfamilyf.24.1 — Cytochrome c oxidase subunit I-like
Family Family familyf.24.1.1 — Cytochrome c oxidase subunit I-like
Domain ID domain_idd5b1bo1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.17 — Transmembrane helix hairpin
Superfamily Superfamily superfamilyf.17.2 — Cytochrome c oxidase subunit II-like, transmembrane region
Family Family familyf.17.2.1 — Cytochrome c oxidase subunit II-like, transmembrane region
Domain ID domain_idd5b1bo2
Class classb — All beta proteins
Fold Fold foldb.6 — Cupredoxin-like
Superfamily Superfamily superfamilyb.6.1 — Cupredoxins
Family Family familyb.6.1.2 — Periplasmic domain of cytochrome c oxidase subunit II
Domain ID domain_idd5b1bp_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.25 — Cytochrome c oxidase subunit III-like
Superfamily Superfamily superfamilyf.25.1 — Cytochrome c oxidase subunit III-like
Family Family familyf.25.1.1 — Cytochrome c oxidase subunit III-like
Domain ID domain_idd5b1bq_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.1 — Mitochondrial cytochrome c oxidase subunit IV
Family Family familyf.23.1.1 — Mitochondrial cytochrome c oxidase subunit IV
Domain ID domain_idd5b1br_
Class classa — All alpha proteins
Fold Fold folda.118 — alpha-alpha superhelix
Superfamily Superfamily superfamilya.118.11 — Cytochrome c oxidase subunit E
Family Family familya.118.11.1 — Cytochrome c oxidase subunit E
Domain ID domain_idd5b1bs_
Class classg — Small proteins
Fold Fold foldg.41 — Rubredoxin-like
Superfamily Superfamily superfamilyg.41.5 — Rubredoxin-like
Family Family familyg.41.5.3 — Cytochrome c oxidase Subunit F
Domain ID domain_idd5b1bt_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.2 — Mitochondrial cytochrome c oxidase subunit VIa
Family Family familyf.23.2.1 — Mitochondrial cytochrome c oxidase subunit VIa
Domain ID domain_idd5b1bu_
Class classa — All alpha proteins
Fold Fold folda.51 — Cytochrome c oxidase subunit h
Superfamily Superfamily superfamilya.51.1 — Cytochrome c oxidase subunit h
Family Family familya.51.1.1 — Cytochrome c oxidase subunit h
Domain ID domain_idd5b1bv_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.3 — Mitochondrial cytochrome c oxidase subunit VIc
Family Family familyf.23.3.1 — Mitochondrial cytochrome c oxidase subunit VIc
Domain ID domain_idd5b1bw_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.4 — Mitochondrial cytochrome c oxidase subunit VIIa
Family Family familyf.23.4.1 — Mitochondrial cytochrome c oxidase subunit VIIa
Domain ID domain_idd5b1bx_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.5 — Mitochondrial cytochrome c oxidase subunit VIIb
Family Family familyf.23.5.1 — Mitochondrial cytochrome c oxidase subunit VIIb
Domain ID domain_idd5b1by_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.6 — Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family Family familyf.23.6.1 — Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Domain ID domain_idd5b1bz_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.7 — Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family Family familyf.23.7.1 — Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

CATH v4.4 (30 domains)

Domain ID domain_id5b1bA00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology210 — Cytochrome C Oxidase; Chain A
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase-like, subunit I domain
Domain ID domain_id5b1bB01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily90 —
Domain ID domain_id5b1bB02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily420 — Cupredoxins - blue copper proteins
Domain ID domain_id5b1bC01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily70 —
Domain ID domain_id5b1bC02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology120 — Four Helix Bundle (Hemerythrin (Met), subunit A)
Homologous superfamily homologous superfamily80 — Cytochrome c oxidase, subunit III, four-helix bundle
Domain ID domain_id5b1bD00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology442 — Cytochrome C Oxidase; Chain D
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase subunit IV
Domain ID domain_id5b1bE00
Class class1 — Mainly Alpha
Architecture architecture25 — Alpha Horseshoe
Topology topology40 — Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Homologous superfamily homologous superfamily40 — Cytochrome c oxidase, subunit Va/VI
Domain ID domain_id5b1bF00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology11 — Cytochrome C Oxidase; Chain F
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit Vb
Domain ID domain_id5b1bG00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology95 — Cytochrome C Oxidase; Chain G
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit VIa
Domain ID domain_id5b1bH00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology10 — Arc Repressor Mutant, subunit A
Homologous superfamily homologous superfamily140 — Cytochrome c oxidase, subunit VIb
Domain ID domain_id5b1bI00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology93 — Cytochrome C Oxidase; Chain I
Homologous superfamily homologous superfamily10 — Mitochondrial cytochrome c oxidase subunit VIc/VIIs
Domain ID domain_id5b1bJ00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology91 — Cytochrome C Oxidase; Chain J
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit VIIa
Domain ID domain_id5b1bK00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology51 — Cytochrome C Oxidase; Chain K
Homologous superfamily homologous superfamily10 — Cytochrome C Oxidase, chain K
Domain ID domain_id5b1bL00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology49 — Cytochrome C Oxidase; Chain L
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase subunit VIIc
Domain ID domain_id5b1bM00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology81 — Cytochrome C Oxidase; Chain M
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit 8
Domain ID domain_id5b1bN00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology210 — Cytochrome C Oxidase; Chain A
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase-like, subunit I domain
Domain ID domain_id5b1bO01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily90 —
Domain ID domain_id5b1bO02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily420 — Cupredoxins - blue copper proteins
Domain ID domain_id5b1bP01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily70 —
Domain ID domain_id5b1bP02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology120 — Four Helix Bundle (Hemerythrin (Met), subunit A)
Homologous superfamily homologous superfamily80 — Cytochrome c oxidase, subunit III, four-helix bundle
Domain ID domain_id5b1bQ00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology442 — Cytochrome C Oxidase; Chain D
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase subunit IV
Domain ID domain_id5b1bR00
Class class1 — Mainly Alpha
Architecture architecture25 — Alpha Horseshoe
Topology topology40 — Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Homologous superfamily homologous superfamily40 — Cytochrome c oxidase, subunit Va/VI
Domain ID domain_id5b1bS00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology11 — Cytochrome C Oxidase; Chain F
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit Vb
Domain ID domain_id5b1bT00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology95 — Cytochrome C Oxidase; Chain G
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit VIa
Domain ID domain_id5b1bU00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology10 — Arc Repressor Mutant, subunit A
Homologous superfamily homologous superfamily140 — Cytochrome c oxidase, subunit VIb
Domain ID domain_id5b1bV00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology93 — Cytochrome C Oxidase; Chain I
Homologous superfamily homologous superfamily10 — Mitochondrial cytochrome c oxidase subunit VIc/VIIs
Domain ID domain_id5b1bW00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology91 — Cytochrome C Oxidase; Chain J
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit VIIa
Domain ID domain_id5b1bX00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology51 — Cytochrome C Oxidase; Chain K
Homologous superfamily homologous superfamily10 — Cytochrome C Oxidase, chain K
Domain ID domain_id5b1bY00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology49 — Cytochrome C Oxidase; Chain L
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase subunit VIIc
Domain ID domain_id5b1bZ00
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology81 — Cytochrome C Oxidase; Chain M
Homologous superfamily homologous superfamily10 — Cytochrome c oxidase, subunit 8
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7. Citations (1)