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5muu

dsRNA bacteriophage phi6 nucleocapsid

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Major inner protein P1

OrganismNot specified

UniProt P11126

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 780 Packaging enzyme P4 × 60 （P11125） Major outer capsid protein × 600 （P07579） Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Packaging enzyme P4 × 1 （P11125） Major outer capsid protein × 10 （P07579） Consistent with protein count
3 Protein heterocomplex Heteromer Protein 65 Packaging enzyme P4 × 5 （P11125） Major outer capsid protein × 50 （P07579） Consistent with protein count
4 Protein heterocomplex Heteromer Protein 78 Packaging enzyme P4 × 6 （P11125） Major outer capsid protein × 60 （P07579） Consistent with protein count
5 Protein heterocomplex Heteromer Protein 13 Packaging enzyme P4 × 1 （P11125） Major outer capsid protein × 10 （P07579） Consistent with protein count

Other States of the Same Protein in the Database

Monomer
4k7h 4k7h 4k7h 4k7h 4k7h

5 assemblies

Homodimer
4btg 4btg 4btq 4btq 5fj5 5fj5

6 assemblies

Homotetramer
9i5c

1 assemblies

Other homooligomers
4btg 4btg 4btg 4btq 4btq 4btq 4k7h 5fj5 5fj5 5fj5

10 assemblies

Heteromeric or nucleic-acid complex
5fj7 5muu 5muu 5muu 5muu 5muu 6hy0 9hu4 9hu5 9hu6 9i7w

11 assemblies

View Construct and Data Evidence
UniProt name P1_BPPH6
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–769； UniProt 1–769 Author chain B； PDBConstruct 1–769； UniProt 1–769

Packaging enzyme P4

OrganismNot specified

UniProt P11125

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 780 Major inner protein P1 × 120 （P11126） Major outer capsid protein × 600 （P07579） Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） Major outer capsid protein × 10 （P07579） Consistent with protein count
3 Protein heterocomplex Heteromer Protein 65 Major inner protein P1 × 10 （P11126） Major outer capsid protein × 50 （P07579） Consistent with protein count
4 Protein heterocomplex Heteromer Protein 78 Major inner protein P1 × 12 （P11126） Major outer capsid protein × 60 （P07579） Consistent with protein count
5 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） Major outer capsid protein × 10 （P07579） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
4blo 4blo 5muv 5muw

4 assemblies

Heteromeric or nucleic-acid complex
5muu 5muu 5muu 5muu 5muu

5 assemblies

View Construct and Data Evidence
UniProt name P4_BPPH6
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C； PDBConstruct 1–332； UniProt 1–332

Major outer capsid protein

OrganismNot specified

UniProt P07579

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 780 Major inner protein P1 × 120 （P11126） Packaging enzyme P4 × 60 （P11125） Consistent with protein count
2 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） Packaging enzyme P4 × 1 （P11125） Consistent with protein count
3 Protein heterocomplex Heteromer Protein 65 Major inner protein P1 × 10 （P11126） Packaging enzyme P4 × 5 （P11125） Consistent with protein count
4 Protein heterocomplex Heteromer Protein 78 Major inner protein P1 × 12 （P11126） Packaging enzyme P4 × 6 （P11125） Consistent with protein count
5 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） Packaging enzyme P4 × 1 （P11125） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
5muu 5muu 5muu 5muu 5muu 9hu4

6 assemblies

View Construct and Data Evidence
UniProt name CAPSD_BPPH6
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D； PDBConstruct 1–149； UniProt 1–149 Author chain E； PDBConstruct 1–149； UniProt 1–149 Author chain F； PDBConstruct 1–149； UniProt 1–149 Author chain G； PDBConstruct 1–149； UniProt 1–149 Author chain H； PDBConstruct 1–149； UniProt 1–149 Author chain I； PDBConstruct 1–149； UniProt 1–149 Author chain J； PDBConstruct 1–149； UniProt 1–149 Author chain K； PDBConstruct 1–149； UniProt 1–149 Author chain L； PDBConstruct 1–149； UniProt 1–149 Author chain M； PDBConstruct 1–149； UniProt 1–149

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5muu
Deposition date deposition_date2017-01-14
Structure title titledsRNA bacteriophage phi6 nucleocapsid
Keywords keywordsicosahedral virus capsid shell, virus; VIRUS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5muu__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5muu__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 1012 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5muu__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)248.20 Å
Total Rg248.40 Å
Atom count1403160
Residues183060
Excluded volume25093000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5muu__assembly_1__model_1 780-meric （780） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 5muu__assembly_2__model_1 tridecameric （13） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 5muu__assembly_3__model_1 65-meric （65） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 5muu__assembly_4__model_1 78-meric （78） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 5muu__assembly_5__model_1 tridecameric （13） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)