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9hu4

Asymmetric unit from transcribing double-layered particle of bacteriophage phi6

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Major inner protein P1

OrganismNot specified

UniProt P11126

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 NTPase × 1 （Q283T8） Major outer capsid protein × 10 （P07579） Consistent with protein count

Other States of the Same Protein in the Database

Monomer
4k7h 4k7h 4k7h 4k7h 4k7h

5 assemblies

Homodimer
4btg 4btg 4btq 4btq 5fj5 5fj5

6 assemblies

Homotetramer
9i5c

1 assemblies

Other homooligomers
4btg 4btg 4btg 4btq 4btq 4btq 4k7h 5fj5 5fj5 5fj5

10 assemblies

Heteromeric or nucleic-acid complex
5fj7 5muu 5muu 5muu 5muu 5muu 6hy0 9hu4 9hu5 9hu6 9i7w

11 assemblies

View Construct and Data Evidence
UniProt name P1_BPPH6
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–766； UniProt 1–766 Author chain B； PDBConstruct 1–766； UniProt 1–766

NTPase

OrganismNot specified

UniProt Q283T8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） Major outer capsid protein × 10 （P07579） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9hu4 9hu5 9hu6

3 assemblies

View Construct and Data Evidence
UniProt name Q283T8_9VIRU
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C； PDBConstruct 1–39； UniProt 293–331

Major outer capsid protein

OrganismNot specified

UniProt P07579

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 13 Major inner protein P1 × 2 （P11126） NTPase × 1 （Q283T8） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
5muu 5muu 5muu 5muu 5muu 9hu4

6 assemblies

View Construct and Data Evidence
UniProt name CAPSD_BPPH6
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D； PDBConstruct 1–148； UniProt 1–148 Author chain E； PDBConstruct 1–148； UniProt 1–148 Author chain F； PDBConstruct 1–148； UniProt 1–148 Author chain G； PDBConstruct 1–148； UniProt 1–148 Author chain H； PDBConstruct 1–148； UniProt 1–148 Author chain I； PDBConstruct 1–148； UniProt 1–148 Author chain J； PDBConstruct 1–148； UniProt 1–148 Author chain K； PDBConstruct 1–148； UniProt 1–148 Author chain L； PDBConstruct 1–148； UniProt 1–148 Author chain M； PDBConstruct 1–148； UniProt 1–148

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9hu4
Deposition date deposition_date2024-12-20
Structure title titleAsymmetric unit from transcribing double-layered particle of bacteriophage phi6
Keywords keywords;cystovirus, phi6, semi-conservative transcription, cryo-EM, cryogenic electron microscopy, localized reconstruction, symmetry relaxation, virus, dsRNA virus, bacteriophage ;; VIRUS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9hu4__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9hu4__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9hu4__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）57.19 Å
Rg (electron density)57.71 Å
Total Rg57.69 Å
Atom count23399
Residues3051
Excluded volume418390 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9hu4__assembly_1__model_1 13-meric （13） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)