Aquifex aeolicus (strain VF5)
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | ZINC ION × 1 SULFATE ION × 1 water × 1 | Consistent with protein count |
| UniProt name | PYRC_AQUAE |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–422； UniProt 1–422 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 6gdd |
| Deposition date deposition_date | 2018-04-23 |
| Structure title title | DIHYDROOROTASE FROM AQUIFEX AEOLICUS UNDER 1200 BAR OF HYDROSTATIC PRESSURE |
| Keywords keywords | Dihydroorotase, Aquifex aeolicus, hydrostatic pressure, room temperature, HYDROLASE; HYDROLASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 21.21 Å |
| Rg (electron density) | 20.38 Å |
| Total Rg | 21.37 Å |
| Atom count | 2895 |
| Residues | 375 |
| Excluded volume | 52204 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | 6gddA01 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 30 — Roll |
| Topology topology | 40 — Urease, subunit C; domain 1 |
| Homologous superfamily homologous superfamily | 10 — Urease, subunit C, domain 1 |
| Domain ID domain_id | 6gddA02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 20 — Alpha-Beta Barrel |
| Topology topology | 20 — TIM Barrel |
| Homologous superfamily homologous superfamily | 140 — Metal-dependent hydrolases |