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6v9t

Tudor domain of TDRD3 in complex with a small molecule

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Tudor domain-containing protein 3

Homo sapiens

UniProt Q9H7E2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine × 2 UNKNOWN ATOM OR ION × 1 water × 1 Consistent with protein count
2 Protein monomer Monomer Protein 1 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine × 1 UNKNOWN ATOM OR ION × 2 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1wji 3pmt 3s6w 5gvd 5gvd 5yj8 6v9t 6v9t 8jtn

9 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
2lto 3pnw 3pnw 3pnw 3pnw 3pnw 3pnw 3pnw 3pnw 5gve 9c9w 9c9y

20 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name TDRD3_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain AAA； PDBConstruct 19–76； UniProt 554–611 Author chain BBB； PDBConstruct 19–76； UniProt 554–611

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6v9t
Deposition date deposition_date2019-12-16
Structure title titleTudor domain of TDRD3 in complex with a small molecule
Keywords keywordsstructural genomics consortium, SGC, TRANSFERASE; TRANSFERASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6v9t__assembly_1__model_1 monomeric （1） Excluded — —
Exclusion reason： The source record does not identify the atom or ion element unambiguously, so a reliable calculation is not possible.
2 1 6v9t__assembly_2__model_1 monomeric （1） Excluded — —
Exclusion reason： The source record does not identify the atom or ion element unambiguously, so a reliable calculation is not possible.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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7. Citations (1)