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6xob

CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Togavirin

Eastern equine encephalitis virus

UniProt Q88678

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 1200 EEEV-143 Fab heavy chain × 240 EEEV-143 Fab light chain × 240 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 20 EEEV-143 Fab heavy chain × 4 EEEV-143 Fab light chain × 4 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 100 EEEV-143 Fab heavy chain × 20 EEEV-143 Fab light chain × 20 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 120 EEEV-143 Fab heavy chain × 24 EEEV-143 Fab light chain × 24 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 20 EEEV-143 Fab heavy chain × 4 EEEV-143 Fab light chain × 4 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
6xo4 6xo4 6xo4 6xo4 6xo4

5 assemblies

Heteromeric or nucleic-acid complex
6xob 6xob 6xob 6xob 6xob 8dwo 8ua4 8ua9 8ufa 8ufb 8ufc

11 assemblies

View Construct and Data Evidence
UniProt name Q88678_EEEV
Isoform —
PDB entities 1, 2, 3
Chains and sequence ranges Author chain A； PDBConstruct 1–441； UniProt 802–1242 Author chain D； PDBConstruct 1–441； UniProt 802–1242 Author chain G； PDBConstruct 1–441； UniProt 802–1242 Author chain J； PDBConstruct 1–441； UniProt 802–1242 Author chain B； PDBConstruct 1–420； UniProt 325–744 Author chain E； PDBConstruct 1–420； UniProt 325–744 Author chain H； PDBConstruct 1–420； UniProt 325–744 Author chain K； PDBConstruct 1–420； UniProt 325–744 Author chain C； PDBConstruct 1–261； UniProt 1–261 Author chain F； PDBConstruct 1–261； UniProt 1–261 Author chain I； PDBConstruct 1–261； UniProt 1–261 Author chain L； PDBConstruct 1–261； UniProt 1–261

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6xob
Deposition date deposition_date2020-07-06
Structure title titleCryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.
Keywords keywordsVLP, Fab, EEEV, VIRAL PROTEIN, Virus-Immune System complex; Virus/Immune System
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6xob__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6xob__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 1012 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6xob__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)309.80 Å
Total Rg309.00 Å
Atom count2252400
Residues342000
Excluded volume38864000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6xob__assembly_1__model_1 1200-meric （1200） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 6xob__assembly_2__model_1 eicosameric （20） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 6xob__assembly_3__model_1 100-meric （100） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 6xob__assembly_4__model_1 120-meric （120） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 6xob__assembly_5__model_1 eicosameric （20） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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7. Citations (1)