6ybd

Structure of a human 48S translational initiation complex - eIF3

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Eukaryotic translation initiation factor 3 subunit M

OrganismNot specified

UniProt Q7L2H7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3M_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 6; PDBConstruct 1–374; UniProt 1–374

Eukaryotic translation initiation factor 3 subunit F

OrganismNot specified

UniProt O00303

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3F_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 4; PDBConstruct 1–357; UniProt 1–357

Eukaryotic translation initiation factor 3 subunit A

OrganismNot specified

UniProt Q14152

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3A_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain u; PDBConstruct 1–1382; UniProt 1–1382

Eukaryotic translation initiation factor 3 subunit E

OrganismNot specified

UniProt P60228

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3E_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain v; PDBConstruct 1–445; UniProt 1–445

Eukaryotic translation initiation factor 3 subunit C

OrganismNot specified

UniProt Q99613

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3C_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain y; PDBConstruct 1–913; UniProt 1–913

Eukaryotic translation initiation factor 3 subunit H

OrganismNot specified

UniProt O15372

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3H_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 8; PDBConstruct 1–352; UniProt 1–352

40S ribosomal protein S7

OrganismNot specified

UniProt P62081

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS7_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–194; UniProt 1–194

40S ribosomal protein S27

OrganismNot specified

UniProt P42677

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS27_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–84; UniProt 1–84

40S ribosomal protein S21

OrganismNot specified

UniProt P63220

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS21_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain K; PDBConstruct 1–83; UniProt 1–83

40S ribosomal protein S17

OrganismNot specified

UniProt P08708

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS17_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain M; PDBConstruct 1–135; UniProt 1–135

40S ribosomal protein S2

OrganismNot specified

UniProt P15880

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS2_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain L; PDBConstruct 1–293; UniProt 1–293

40S ribosomal protein S3a

OrganismNot specified

UniProt P61247

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS3A_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain O; PDBConstruct 1–264; UniProt 1–264

40S ribosomal protein SA

OrganismNot specified

UniProt P08865

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RSSA_HUMAN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain N; PDBConstruct 1–295; UniProt 1–295

40S ribosomal protein S26

OrganismNot specified

UniProt P62854

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS26_HUMAN
Isoform —
PDB entities 14
Chains and sequence ranges Author chain Q; PDBConstruct 1–115; UniProt 1–115

40S ribosomal protein S14

OrganismNot specified

UniProt P62263

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS14_HUMAN
Isoform —
PDB entities 15
Chains and sequence ranges Author chain P; PDBConstruct 1–151; UniProt 1–151

40S ribosomal protein S13

OrganismNot specified

UniProt P62277

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS13_HUMAN
Isoform —
PDB entities 16
Chains and sequence ranges Author chain I; PDBConstruct 1–151; UniProt 1–151

Eukaryotic translation initiation factor 3 subunit D

OrganismNot specified

UniProt O15371

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3D_HUMAN
Isoform —
PDB entities 17
Chains and sequence ranges Author chain x; PDBConstruct 1–548; UniProt 1–548

Eukaryotic translation initiation factor 3 subunit K

OrganismNot specified

UniProt Q9UBQ5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit L × 1 (Q9Y262) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3K_HUMAN
Isoform —
PDB entities 18
Chains and sequence ranges Author chain 3; PDBConstruct 1–218; UniProt 1–218

Eukaryotic translation initiation factor 3 subunit L

OrganismNot specified

UniProt Q9Y262

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 19 Eukaryotic translation initiation factor 3 subunit M × 1 (Q7L2H7) Eukaryotic translation initiation factor 3 subunit F × 1 (O00303) Eukaryotic translation initiation factor 3 subunit A × 1 (Q14152) Eukaryotic translation initiation factor 3 subunit E × 1 (P60228) Eukaryotic translation initiation factor 3 subunit C × 1 (Q99613) Eukaryotic translation initiation factor 3 subunit H × 1 (O15372) 40S ribosomal protein S7 × 1 (P62081) 40S ribosomal protein S27 × 1 (P42677) 40S ribosomal protein S21 × 1 (P63220) 40S ribosomal protein S17 × 1 (P08708) 40S ribosomal protein S2 × 1 (P15880) 40S ribosomal protein S3a × 1 (P61247) 40S ribosomal protein SA × 1 (P08865) 40S ribosomal protein S26 × 1 (P62854) 40S ribosomal protein S14 × 1 (P62263) 40S ribosomal protein S13 × 1 (P62277) Eukaryotic translation initiation factor 3 subunit D × 1 (O15371) Eukaryotic translation initiation factor 3 subunit K × 1 (Q9UBQ5) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EIF3L_HUMAN
Isoform —
PDB entities 19
Chains and sequence ranges Author chain 5; PDBConstruct 1–564; UniProt 1–564

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6ybd
Deposition date deposition_date2020-03-16
Structure title titleStructure of a human 48S translational initiation complex - eIF3
Keywords keywordseIF3, ribosome, translation, initiation complex; TRANSLATION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6ybd__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6ybd__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6ybd__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)65.35 Å
Rg (electron density)64.65 Å
Total Rg64.47 Å
Atom count30734
Residues4421
Excluded volume536490 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6ybd__assembly_1__model_1 nonadecameric (19) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (19)

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7. Citations (1)