7vlx

Cryo-EM structures of Listeria monocytogenes man-PTS

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Mannose/fructose/sorbose family PTS transporter subunit IIC

Listeria monocytogenes

UniProt S5LAD9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 6 PTS mannose family transporter subunit IID × 3 (A0A1E8EBU8) alpha-D-mannopyranose × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name S5LAD9_LISMN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–268; UniProt 1–268 Author chain C; PDBConstruct 1–268; UniProt 1–268 Author chain Y; PDBConstruct 1–268; UniProt 1–268

PTS mannose family transporter subunit IID

Listeria monocytogenes

UniProt A0A1E8EBU8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 6 Mannose/fructose/sorbose family PTS transporter subunit IIC × 3 (S5LAD9) alpha-D-mannopyranose × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A1E8EBU8_LISMN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–303; UniProt 1–303 Author chain D; PDBConstruct 1–303; UniProt 1–303 Author chain Z; PDBConstruct 1–303; UniProt 1–303

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7vlx
Deposition date deposition_date2021-10-05
Structure title titleCryo-EM structures of Listeria monocytogenes man-PTS
Keywords keywords;antimicrobial peptides; bacteriocins; pediocin PA-1; pediocin-like/class IIa bacteriocins; antibiotic resistance; mannose phosphotransferase; man-PTS, MEMBRANE PROTEIN ;; MEMBRANE PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7vlx__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7vlx__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7vlx__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)39.90 Å
Rg (electron density)38.91 Å
Total Rg39.36 Å
Atom count12303
Residues1635
Excluded volume225640 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7vlx__assembly_1__model_1 hexameric (6) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)