7vpw

Crystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

BRCA1-associated protein 1 (BAP1)

Homo sapiens

UniProt B3KS40

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Transportin-1 × 1 (Q92973) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name B3KS40_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain B; PDBConstruct 1–19; UniProt 77–95

Transportin-1

Homo sapiens

UniProt Q92973

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 BRCA1-associated protein 1 (BAP1) × 1 (B3KS40) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TNPO1_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 4–340; UniProt 8–344 Author chain A; PDBConstruct 348–870; UniProt 376–898

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7vpw
Deposition date deposition_date2021-10-18
Structure title titleCrystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)
Keywords keywordsTransportin-1, BRCA1-associated protein 1, BAP1, nuclear import, PY-NLS, deubiquitinase, DUB, PROTEIN TRANSPORT; PROTEIN TRANSPORT
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7vpw__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7vpw__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7vpw__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)37.02 Å
Rg (electron density)36.52 Å
Total Rg36.78 Å
Atom count6705
Residues841
Excluded volume120770 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7vpw__assembly_1__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)