7vpw

Crystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)

Method: X-RAY DIFFRACTION

1. Protein Identity and Related Structures Protein Identity & Related Structures

BRCA1-associated protein 1 (BAP1)

Homo sapiens

UniProt B3KS40

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Transportin-1 × 1 (Q92973) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name B3KS40_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain B; PDBConstruct 1–19; UniProt 77–95

Transportin-1

Homo sapiens

UniProt Q92973

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 BRCA1-associated protein 1 (BAP1) × 1 (B3KS40) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TNPO1_HUMAN
Isoform
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 4–340; UniProt 8–344 Author chain A; PDBConstruct 348–870; UniProt 376–898

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

2. Structure Basics 2. Structure Basics

Entry ID entry_id7vpw
Deposition date deposition_date2021-10-18
Structure title titleCrystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)
Keywords keywordsTransportin-1, BRCA1-associated protein 1, BAP1, nuclear import, PY-NLS, deubiquitinase, DUB, PROTEIN TRANSPORT; PROTEIN TRANSPORT
Experimental Method methodX-RAY DIFFRACTION

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7vpw__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7vpw__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7vpw__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)37.02 Å
Rg (electron density)36.52 Å
Total Rg36.78 Å
Atom count6705
Residues841
Excluded volume120770 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7vpw__assembly_1__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download

4. Crystallography and Experiment 4. Crystallography & Experiment

5. Entities and Polymers Entities & Polymers (2)

7. Citations (1)