cAMP-dependent protein kinase type II-alpha regulatory subunit
Homo sapiens
State in the Current Structure
| Assembly | Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Associated Components | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|
| 1 | Protein heterocomplex Heteromer Protein × 3 PDB declaration: trimeric(3) Consistent with protein copy count | Chain A; UniProt 1–48 Chain B; UniProt 1–48 | Fragment:N-terminal docking and dimerization domain, residues 1-52 | Isoform 3 of Microtubule-associated protein 2 × 1 (P15146) | SOLUTION NMR NMR measurement conditions:pH 6.9;300.2 K;Ionic strength (raw mmCIF value) 100;Pressure 1 NMR sample composition:0.5 mM [U-13C; U-15N] Microtubule associated protein 2c, 2 mM cAMP-dependent protein kinase type II-alpha regulatory subunit, 50 mM MOPS, 100 mM sodium chloride, 10 % v/v D2O, 17 mM sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.56 mM Microtubule associated protein 2c, 1.12 mM [U-13C; U-15N] cAMP-dependent protein kinase type II-alpha regulatory subunit, 50 mM MOPS, 100 mM sodium chloride, 10 % v/v D2O, 10 mM sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.1 mM [U-15N] Microtubule associated protein 2c, 0.4 mM cAMP-dependent protein kinase type II-alpha regulatory subunit, 50 mM MOPS, 100 mM sodium chloride, 8 % v/v D2O, 40 mg/mL Pf1 phage, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.23 mM [U-15N] Microtubule associated protein 2c, 0.92 mM cAMP-dependent protein kinase type II-alpha regulatory subunit, 50 mM MOPS, 100 mM sodium chloride, 7.5 % v/v D2O, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.45 mM I,V-13C; I,L,V-15N Microtubule associated protein 2c, 1.8 mM cAMP-dependent protein kinase type II-alpha regulatory subunit, 50 mM MOPS, 100 mM sodium chloride, 7.5 % v/v D2O, 90% H2O/10% D2O | 90% H2O/10% D2O | Resolution not provided |
Other States of the Same Protein in the Database
Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.
| Other PDB | Difference from Current Entry 8S8O | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 2IZX Molecular Basis of AKAP Specificity for PKA Regulatory Subunits Deposited 2006-07-27 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain A
3–43(41 aa)
Fragment:3-43
Chain B
3–43(41 aa)
Fragment:3-43
|
Not recorded | DTD DITHIANE DIOL × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 7.5;1 M TRI-SODIUM CITRATE, 0.1 M TRIS-HCL PH 7.5
|
Resolution 1.30 Å R-free 0.194 |
| 2KYG Structure of the AML1-ETO Nervy Domain - PKA(RIIa) complex and its contribution to AML1-ETO activity Deposited 2010-05-25 | Different construct Different experimental conditions | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain A
1–45(45 aa)
Chain B
1–45(45 aa)
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 4;303 K;Ionic strength (raw mmCIF value) 0.0;Pressure ambient
NMR sample composition
2 mM [U-99% 13C; U-99% 15N] NHR3, 2 mM [U-99% 13C; U-99% 15N] PKA(RIIa), 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain A
2–44(43 aa)
Chain B
2–44(43 aa)
|
Not recorded | CD CADMIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain C
2–44(43 aa)
Chain D
2–44(43 aa)
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain E
2–44(43 aa)
Chain F
2–44(43 aa)
|
Not recorded | CD CADMIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain G
2–44(43 aa)
Chain H
2–44(43 aa)
|
Not recorded | CD CADMIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain I
2–44(43 aa)
Chain J
2–44(43 aa)
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 4ZP3 AKAP18:PKA-RIIalpha structure reveals crucial anchor points for recognition of regulatory subunits of PKA Deposited 2015-05-07 | Different construct Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain K
2–44(43 aa)
Chain L
2–44(43 aa)
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;PEG3350, Cadmium chloride, Sodium acetate
|
Resolution 2.63 Å R-free 0.268 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain B
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain C
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain D
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 3 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain E
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain F
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 4 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain G
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain H
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 5 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain I
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain J
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H77 Crystal structure of the PKA-protein A fusion protein Deposited 2016-11-17 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 6 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain K
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
Chain L
5–41(37 aa)
Fragment:UNP RESIDUES 5-41,UNP RESIDUES 220-268
|
Mutation:G222A, G240A Mutation:G222A, G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 4.5;296 K;0.1M sodium acetate pH 4.5, 0.68M sodium citrate pH 4.5
|
Resolution 3.20 Å R-free 0.284 |
| 5H78 Crystal structure of the PKA-DHR14 fusion protein Deposited 2016-11-17 | Different construct Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
5–41(37 aa)
Fragment:RESIDUES 4-40 (UNP RESIDUES 5-41),RESIDUES 41-196
Chain B
5–41(37 aa)
Fragment:RESIDUES 4-40 (UNP RESIDUES 5-41),RESIDUES 41-196
|
Not recorded | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;296 K;0.05M sodium cacodylate pH 6.5, 0.01M magnesium chloride, 0.2M potassium chloride, 12%(w/v) PEG 4000
|
Resolution 2.00 Å R-free 0.207 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
5–44(40 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain B
5–44(40 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation:G240A Mutation:G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8.5;296 K;100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 5XBY Crystal structure of the PKA-Protein A fusion protein (end-to-end fusion) Deposited 2017-03-21 | Different construct Different mutation/modification Different oligomeric state Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 2 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain C
5–44(40 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
Chain D
5–44(40 aa)
Fragment:UNP RESIDUES 5-44,UNP RESIDUES 217-269
|
Mutation:G240A Mutation:G240A | No recorded non-water small molecule |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 8.5;296 K;100mM Tris pH 8.5, 2.16M Sodium formate
|
Resolution 3.25 Å R-free 0.307 |
| 9NXN Crystal structure of CN:RII alpha Deposited 2025-03-25 | Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric |
Chain C
44–103(60 aa)
|
Not recorded | CA CALCIUM ION × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5;289 K;0.1 M sodium citrate pH 5.0, 0.1 M Magnesium chloride hexahydrate, 15% PEG 4000
|
Resolution 2.10 Å R-free 0.250 |
7 other PDB entries and 18 assemblies. Open the comparison page and filter oligomeric states
View Construct and Data Evidence
| UniProt name | KAP2_HUMAN |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A; PDBConstruct 5–52; UniProt 1–48 Author chain B; PDBConstruct 5–52; UniProt 1–48 |