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8x26

Crystal structure of H5 hemagglutinin from human-infecting H5N8 influenza virus in complex with LSTa

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Hemagglutinin

Influenza A virus

UniProt A0A8E4ZAK5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Homooligomer Protein 3 其他Polymer 5 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 2 ;N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose ; × 3 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 Consistent with protein count
2 Other combination Homooligomer Protein 3 其他Polymer 4 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 ;N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose ; × 3 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
8x28 8x28 8x29

3 assemblies

Heteromeric or nucleic-acid complex
8x26 8x26 8x27 8x27 8x2c 8x2d 8x2f 8zdv 9dio 9dio 9dio 9dwe

15 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name A0A8E4ZAK5_9INFA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–506； UniProt 17–522 Author chain B； PDBConstruct 1–506； UniProt 17–522 Author chain C； PDBConstruct 1–506； UniProt 17–522 Author chain D； PDBConstruct 1–506； UniProt 17–522 Author chain E； PDBConstruct 1–506； UniProt 17–522 Author chain F； PDBConstruct 1–506； UniProt 17–522

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8x26
Deposition date deposition_date2023-11-09
Structure title titleCrystal structure of H5 hemagglutinin from human-infecting H5N8 influenza virus in complex with LSTa
Keywords keywordsVIRAL PROTEIN-IMMUNE SYSTEM COMPLEX; VIRAL PROTEIN/IMMUNE SYSTEM
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8x26__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8x26__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8x26__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）42.71 Å
Rg (electron density)42.33 Å
Total Rg42.39 Å
Atom count11896
Residues1451
Excluded volume209650 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8x26__assembly_1__model_1 trimeric （3） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 8x26__assembly_2__model_1 trimeric （3） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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7. Citations (1)