8z5n

Cryo-EM structure of the LPHT ring

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Component of sodium-driven polar flagellar motor

OrganismNot specified

UniProt P74944

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Sodium-type flagellar motor component × 26 (Q93R25) Flagellar L-ring protein × 26 (A0A9W4BB53) Flagellar assembly lipoprotein FlgP × 26 (A0A0H0Y943) The N-terminus of Flagellar L-ring protein × 26 Flagellar P-ring protein × 26 (A0A9W4BSQ4) Flagella basal-body protein × 26 (D9N551) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name P74944_VIBAL
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–293; UniProt 1–293 Author chain B; PDBConstruct 1–293; UniProt 1–293 Author chain E; PDBConstruct 1–293; UniProt 1–293 Author chain F; PDBConstruct 1–293; UniProt 1–293 Author chain I; PDBConstruct 1–293; UniProt 1–293 Author chain J; PDBConstruct 1–293; UniProt 1–293 Author chain M; PDBConstruct 1–293; UniProt 1–293 Author chain N; PDBConstruct 1–293; UniProt 1–293 Author chain Q; PDBConstruct 1–293; UniProt 1–293 Author chain R; PDBConstruct 1–293; UniProt 1–293 Author chain U; PDBConstruct 1–293; UniProt 1–293 Author chain V; PDBConstruct 1–293; UniProt 1–293 Author chain Y; PDBConstruct 1–293; UniProt 1–293 Author chain Z; PDBConstruct 1–293; UniProt 1–293 Author chain c; PDBConstruct 1–293; UniProt 1–293 Author chain d; PDBConstruct 1–293; UniProt 1–293 Author chain g; PDBConstruct 1–293; UniProt 1–293 Author chain h; PDBConstruct 1–293; UniProt 1–293 Author chain k; PDBConstruct 1–293; UniProt 1–293 Author chain l; PDBConstruct 1–293; UniProt 1–293 Author chain o; PDBConstruct 1–293; UniProt 1–293 Author chain p; PDBConstruct 1–293; UniProt 1–293 Author chain s; PDBConstruct 1–293; UniProt 1–293 Author chain t; PDBConstruct 1–293; UniProt 1–293 Author chain w; PDBConstruct 1–293; UniProt 1–293 Author chain x; PDBConstruct 1–293; UniProt 1–293

Sodium-type flagellar motor component

OrganismNot specified

UniProt Q93R25

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Component of sodium-driven polar flagellar motor × 26 (P74944) Flagellar L-ring protein × 26 (A0A9W4BB53) Flagellar assembly lipoprotein FlgP × 26 (A0A0H0Y943) The N-terminus of Flagellar L-ring protein × 26 Flagellar P-ring protein × 26 (A0A9W4BSQ4) Flagella basal-body protein × 26 (D9N551) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q93R25_VIBAL
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–211; UniProt 1–211 Author chain D; PDBConstruct 1–211; UniProt 1–211 Author chain G; PDBConstruct 1–211; UniProt 1–211 Author chain H; PDBConstruct 1–211; UniProt 1–211 Author chain K; PDBConstruct 1–211; UniProt 1–211 Author chain L; PDBConstruct 1–211; UniProt 1–211 Author chain O; PDBConstruct 1–211; UniProt 1–211 Author chain P; PDBConstruct 1–211; UniProt 1–211 Author chain S; PDBConstruct 1–211; UniProt 1–211 Author chain T; PDBConstruct 1–211; UniProt 1–211 Author chain W; PDBConstruct 1–211; UniProt 1–211 Author chain X; PDBConstruct 1–211; UniProt 1–211 Author chain a; PDBConstruct 1–211; UniProt 1–211 Author chain b; PDBConstruct 1–211; UniProt 1–211 Author chain e; PDBConstruct 1–211; UniProt 1–211 Author chain f; PDBConstruct 1–211; UniProt 1–211 Author chain i; PDBConstruct 1–211; UniProt 1–211 Author chain j; PDBConstruct 1–211; UniProt 1–211 Author chain m; PDBConstruct 1–211; UniProt 1–211 Author chain n; PDBConstruct 1–211; UniProt 1–211 Author chain q; PDBConstruct 1–211; UniProt 1–211 Author chain r; PDBConstruct 1–211; UniProt 1–211 Author chain u; PDBConstruct 1–211; UniProt 1–211 Author chain v; PDBConstruct 1–211; UniProt 1–211 Author chain y; PDBConstruct 1–211; UniProt 1–211 Author chain z; PDBConstruct 1–211; UniProt 1–211

Flagellar L-ring protein

OrganismNot specified

UniProt A0A9W4BB53

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Component of sodium-driven polar flagellar motor × 26 (P74944) Sodium-type flagellar motor component × 26 (Q93R25) Flagellar assembly lipoprotein FlgP × 26 (A0A0H0Y943) The N-terminus of Flagellar L-ring protein × 26 Flagellar P-ring protein × 26 (A0A9W4BSQ4) Flagella basal-body protein × 26 (D9N551) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A9W4BB53_VIBAL
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 1; PDBConstruct 1–259; UniProt 1–259 Author chain 6; PDBConstruct 1–259; UniProt 1–259 Author chain A4; PDBConstruct 1–259; UniProt 1–259 Author chain A9; PDBConstruct 1–259; UniProt 1–259 Author chain AA; PDBConstruct 1–259; UniProt 1–259 Author chain AF; PDBConstruct 1–259; UniProt 1–259 Author chain AK; PDBConstruct 1–259; UniProt 1–259 Author chain AP; PDBConstruct 1–259; UniProt 1–259 Author chain AU; PDBConstruct 1–259; UniProt 1–259 Author chain AZ; PDBConstruct 1–259; UniProt 1–259 Author chain Ae; PDBConstruct 1–259; UniProt 1–259 Author chain Aj; PDBConstruct 1–259; UniProt 1–259 Author chain Ao; PDBConstruct 1–259; UniProt 1–259 Author chain At; PDBConstruct 1–259; UniProt 1–259 Author chain Ay; PDBConstruct 1–259; UniProt 1–259 Author chain B2; PDBConstruct 1–259; UniProt 1–259 Author chain BD; PDBConstruct 1–259; UniProt 1–259 Author chain BI; PDBConstruct 1–259; UniProt 1–259 Author chain BN; PDBConstruct 1–259; UniProt 1–259 Author chain BS; PDBConstruct 1–259; UniProt 1–259 Author chain BX; PDBConstruct 1–259; UniProt 1–259 Author chain Bc; PDBConstruct 1–259; UniProt 1–259 Author chain Bh; PDBConstruct 1–259; UniProt 1–259 Author chain Bm; PDBConstruct 1–259; UniProt 1–259 Author chain Br; PDBConstruct 1–259; UniProt 1–259 Author chain Bw; PDBConstruct 1–259; UniProt 1–259

Flagellar assembly lipoprotein FlgP

OrganismNot specified

UniProt A0A0H0Y943

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Component of sodium-driven polar flagellar motor × 26 (P74944) Sodium-type flagellar motor component × 26 (Q93R25) Flagellar L-ring protein × 26 (A0A9W4BB53) The N-terminus of Flagellar L-ring protein × 26 Flagellar P-ring protein × 26 (A0A9W4BSQ4) Flagella basal-body protein × 26 (D9N551) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A0H0Y943_VIBAL
Isoform —
PDB entities 4
Chains and sequence ranges Author chain 2; PDBConstruct 1–143; UniProt 1–143 Author chain 7; PDBConstruct 1–143; UniProt 1–143 Author chain A0; PDBConstruct 1–143; UniProt 1–143 Author chain A5; PDBConstruct 1–143; UniProt 1–143 Author chain AB; PDBConstruct 1–143; UniProt 1–143 Author chain AG; PDBConstruct 1–143; UniProt 1–143 Author chain AL; PDBConstruct 1–143; UniProt 1–143 Author chain AQ; PDBConstruct 1–143; UniProt 1–143 Author chain AV; PDBConstruct 1–143; UniProt 1–143 Author chain Aa; PDBConstruct 1–143; UniProt 1–143 Author chain Af; PDBConstruct 1–143; UniProt 1–143 Author chain Ak; PDBConstruct 1–143; UniProt 1–143 Author chain Ap; PDBConstruct 1–143; UniProt 1–143 Author chain Au; PDBConstruct 1–143; UniProt 1–143 Author chain Az; PDBConstruct 1–143; UniProt 1–143 Author chain B3; PDBConstruct 1–143; UniProt 1–143 Author chain BE; PDBConstruct 1–143; UniProt 1–143 Author chain BJ; PDBConstruct 1–143; UniProt 1–143 Author chain BO; PDBConstruct 1–143; UniProt 1–143 Author chain BT; PDBConstruct 1–143; UniProt 1–143 Author chain BY; PDBConstruct 1–143; UniProt 1–143 Author chain Bd; PDBConstruct 1–143; UniProt 1–143 Author chain Bi; PDBConstruct 1–143; UniProt 1–143 Author chain Bn; PDBConstruct 1–143; UniProt 1–143 Author chain Bs; PDBConstruct 1–143; UniProt 1–143 Author chain Bx; PDBConstruct 1–143; UniProt 1–143

Flagellar P-ring protein

OrganismNot specified

UniProt A0A9W4BSQ4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Component of sodium-driven polar flagellar motor × 26 (P74944) Sodium-type flagellar motor component × 26 (Q93R25) Flagellar L-ring protein × 26 (A0A9W4BB53) Flagellar assembly lipoprotein FlgP × 26 (A0A0H0Y943) The N-terminus of Flagellar L-ring protein × 26 Flagella basal-body protein × 26 (D9N551) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A9W4BSQ4_VIBAL
Isoform —
PDB entities 6
Chains and sequence ranges Author chain 4; PDBConstruct 1–363; UniProt 1–363 Author chain 9; PDBConstruct 1–363; UniProt 1–363 Author chain A2; PDBConstruct 1–363; UniProt 1–363 Author chain A7; PDBConstruct 1–363; UniProt 1–363 Author chain AD; PDBConstruct 1–363; UniProt 1–363 Author chain AI; PDBConstruct 1–363; UniProt 1–363 Author chain AN; PDBConstruct 1–363; UniProt 1–363 Author chain AS; PDBConstruct 1–363; UniProt 1–363 Author chain AX; PDBConstruct 1–363; UniProt 1–363 Author chain Ac; PDBConstruct 1–363; UniProt 1–363 Author chain Ah; PDBConstruct 1–363; UniProt 1–363 Author chain Am; PDBConstruct 1–363; UniProt 1–363 Author chain Ar; PDBConstruct 1–363; UniProt 1–363 Author chain Aw; PDBConstruct 1–363; UniProt 1–363 Author chain B5; PDBConstruct 1–363; UniProt 1–363 Author chain BB; PDBConstruct 1–363; UniProt 1–363 Author chain BG; PDBConstruct 1–363; UniProt 1–363 Author chain BL; PDBConstruct 1–363; UniProt 1–363 Author chain BQ; PDBConstruct 1–363; UniProt 1–363 Author chain BV; PDBConstruct 1–363; UniProt 1–363 Author chain Ba; PDBConstruct 1–363; UniProt 1–363 Author chain Bf; PDBConstruct 1–363; UniProt 1–363 Author chain Bk; PDBConstruct 1–363; UniProt 1–363 Author chain Bp; PDBConstruct 1–363; UniProt 1–363 Author chain Bu; PDBConstruct 1–363; UniProt 1–363 Author chain Bz; PDBConstruct 1–363; UniProt 1–363

Flagella basal-body protein

OrganismNot specified

UniProt D9N551

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 182 Component of sodium-driven polar flagellar motor × 26 (P74944) Sodium-type flagellar motor component × 26 (Q93R25) Flagellar L-ring protein × 26 (A0A9W4BB53) Flagellar assembly lipoprotein FlgP × 26 (A0A0H0Y943) The N-terminus of Flagellar L-ring protein × 26 Flagellar P-ring protein × 26 (A0A9W4BSQ4) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name D9N551_VIBAL
Isoform —
PDB entities 7
Chains and sequence ranges Author chain 0; PDBConstruct 1–377; UniProt 1–377 Author chain 5; PDBConstruct 1–377; UniProt 1–377 Author chain A3; PDBConstruct 1–377; UniProt 1–377 Author chain A8; PDBConstruct 1–377; UniProt 1–377 Author chain AE; PDBConstruct 1–377; UniProt 1–377 Author chain AJ; PDBConstruct 1–377; UniProt 1–377 Author chain AO; PDBConstruct 1–377; UniProt 1–377 Author chain AT; PDBConstruct 1–377; UniProt 1–377 Author chain AY; PDBConstruct 1–377; UniProt 1–377 Author chain Ad; PDBConstruct 1–377; UniProt 1–377 Author chain Ai; PDBConstruct 1–377; UniProt 1–377 Author chain An; PDBConstruct 1–377; UniProt 1–377 Author chain As; PDBConstruct 1–377; UniProt 1–377 Author chain Ax; PDBConstruct 1–377; UniProt 1–377 Author chain B1; PDBConstruct 1–377; UniProt 1–377 Author chain B6; PDBConstruct 1–377; UniProt 1–377 Author chain BC; PDBConstruct 1–377; UniProt 1–377 Author chain BH; PDBConstruct 1–377; UniProt 1–377 Author chain BM; PDBConstruct 1–377; UniProt 1–377 Author chain BR; PDBConstruct 1–377; UniProt 1–377 Author chain BW; PDBConstruct 1–377; UniProt 1–377 Author chain Bb; PDBConstruct 1–377; UniProt 1–377 Author chain Bg; PDBConstruct 1–377; UniProt 1–377 Author chain Bl; PDBConstruct 1–377; UniProt 1–377 Author chain Bq; PDBConstruct 1–377; UniProt 1–377 Author chain Bv; PDBConstruct 1–377; UniProt 1–377

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8z5n
Deposition date deposition_date2024-04-18
Structure title titleCryo-EM structure of the LPHT ring
Keywords keywordsPolar flagellum, Polar flagellar motor, LPHT ring, Bushing, MOTOR PROTEIN; MOTOR PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8z5n__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8z5n__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8z5n__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)132.10 Å
Total Rg132.00 Å
Atom count269711
Residues34671
Excluded volume4773000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8z5n__assembly_1__model_1 182-meric (182) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (7)

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7. Citations (1)