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9imx

Immune complex of HEV E2s and P1-5B nanobody

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Secreted protein ORF2

Hepatitis E virus (strain Pakistan)

UniProt P33426

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 P1-5B nanobody × 1 water × 2 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 P1-5B nanobody × 1 water × 2 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 2 P1-5B nanobody × 1 water × 2 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 2 P1-5B nanobody × 1 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer
3ggq

1 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9imx 9imx 9imx 9imx 9iy2 9iy2

6 assemblies

View Construct and Data Evidence
UniProt name CAPSD_HEVPA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–150； UniProt 457–606 Author chain B； PDBConstruct 1–150； UniProt 457–606 Author chain E； PDBConstruct 1–150； UniProt 457–606 Author chain F； PDBConstruct 1–150； UniProt 457–606

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9imx
Deposition date deposition_date2024-07-04
Last revision last_revision2025-09-03
Structure title titleImmune complex of HEV E2s and P1-5B nanobody
Keywords keywordsImmune complex, hepatitis E virus, nanobody, VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex; VIRAL PROTEIN/IMMUNE SYSTEM
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9imx__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9imx__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9imx__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）21.52 Å
Rg (electron density)20.82 Å
Total Rg21.65 Å
Atom count1828
Residues242
Excluded volume32300 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9imx__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 9imx__assembly_2__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 9imx__assembly_3__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 9imx__assembly_4__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)