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9pmn

;Crystal structure of Capsular polysaccharide biosynthesis protein from Bordetella pertussis in complex with NAD and uridine-diphosphate-n-acetylgalactosamine ;

Method: X-RAY DIFFRACTION Dmax: 118.3 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9pmn

P(r) Distribution

P(r) distribution for 9pmn
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1. Structure Basics

entry_id9pmn
deposition_date2025-07-18
last_revision2025-08-06
title;Crystal structure of Capsular polysaccharide biosynthesis protein from Bordetella pertussis in complex with NAD and uridine-diphosphate-n-acetylgalactosamine ;
keywords;SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, Capsular polysaccharide biosynthesis protein, Bordetella pertussis, ISOMERASE ;; ISOMERASE
methodX-RAY DIFFRACTION
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier37.14 Å
rg_electron36.54 Å
i0376162000.00
molecular_weight153330.0 kDa
excluded_volume189710 ų
envelope_volume235990 ų
shell_volume52248 ų
envelope_diameter123.2 Å
shell_rg44.11 Å
envelope_rg36.07 Å
shape_rg36.55 Å
total_rg36.96 Å
total_atoms10795
n_residues1358
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax118.3 Å
rg_real37.00 Å
rg_real_error0.93 Å
i0_real3.7620e+08
i0_real_error5.8490e+06
rg_reciprocal37.09 Å
i0_reciprocal376200000.0000
total_estimate0.9017
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary52.3 Å
skewness0.138
kurtosis-0.602
angular_range— – 0.2150 Å−1
current_alpha0.0000
highest_alpha159800000.0000
n_real_points44
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.926; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.941
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4. Crystallography & Experiment

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5. Entities & Polymer Info (6)

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6. Citations (1)

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7. Files & Curves (10)