9t5k
Local refinement of RNA-free assembled Langya virus N-core
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9t5k |
| deposition_date | 2025-11-05 |
| title | Local refinement of RNA-free assembled Langya virus N-core |
| keywords | Henipavirus, Langya virus, cryo-EM, nucleocapsid, nucleoprotein, RNA, VIRAL PROTEIN; VIRAL PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.70 Å |
| rg_electron | 26.87 Å |
| i0 | 30001500.00 |
| molecular_weight | 43073.0 kDa |
| excluded_volume | 54448 ų |
| envelope_volume | 72474 ų |
| shell_volume | 23935 ų |
| envelope_diameter | 97.1 Å |
| shell_rg | 32.32 Å |
| envelope_rg | 27.07 Å |
| shape_rg | 26.88 Å |
| total_rg | 27.52 Å |
| total_atoms | 3030 |
| n_residues | 381 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 93.7 Å |
| rg_real | 27.91 Å |
| rg_real_error | 0.83 Å |
| i0_real | 3.0000e+07 |
| i0_real_error | 4.5750e+05 |
| rg_reciprocal | 27.85 Å |
| i0_reciprocal | 30000000.0000 |
| total_estimate | 0.8603 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 26.3 Å |
| skewness | 0.467 |
| kurtosis | -0.413 |
| angular_range | — – 0.2850 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5047000.0000 |
| n_real_points | 58 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.806; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.830; Smooth: 0.932 |