9ta4
Pyrococcus abyssi Rubredoxin @ 0.55 Angstrom resolution, 50 kGy structure
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ta4 |
| deposition_date | 2025-11-18 |
| title | Pyrococcus abyssi Rubredoxin @ 0.55 Angstrom resolution, 50 kGy structure |
| keywords | Rubredoxin, ELECTRON TRANSPORT; ELECTRON TRANSPORT |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.76 Å |
| rg_electron | 10.27 Å |
| i0 | 1014900.00 |
| molecular_weight | 6255.0 kDa |
| excluded_volume | 7598 ų |
| envelope_volume | 8258 ų |
| shell_volume | 7161 ų |
| envelope_diameter | 35.8 Å |
| shell_rg | 15.35 Å |
| envelope_rg | 10.67 Å |
| shape_rg | 10.23 Å |
| total_rg | 11.68 Å |
| total_atoms | 823 |
| n_residues | 57 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 37.6 Å |
| rg_real | 11.69 Å |
| rg_real_error | 0.21 Å |
| i0_real | 1.0150e+06 |
| i0_real_error | 9.0120e+03 |
| rg_reciprocal | 11.69 Å |
| i0_reciprocal | 1015000.0000 |
| total_estimate | 0.8859 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.7 Å |
| skewness | 0.136 |
| kurtosis | -0.261 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 100000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.846; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.975 |