9u8n
;Crystal structure of cupin-domain containing protein (AzcA) forming triazine (6-amino-4-oxo-4,5-dihydro-1,3,5-triazine-2-carboxylic acid) moiety from Streptomyces mobaraensis in complex with manganese and imidazole ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9u8n |
| deposition_date | 2025-03-26 |
| last_revision | 2026-04-01 |
| title | ;Crystal structure of cupin-domain containing protein (AzcA) forming triazine (6-amino-4-oxo-4,5-dihydro-1,3,5-triazine-2-carboxylic acid) moiety from Streptomyces mobaraensis in complex with manganese and imidazole ; |
| keywords | cupin-domain containing protein, AzcA, 5-azacytidine biosynthesis, OXIDOREDUCTASE; OXIDOREDUCTASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 22.01 Å |
| rg_electron | 21.04 Å |
| i0 | 34312600.00 |
| molecular_weight | 43535.0 kDa |
| excluded_volume | 53545 ų |
| envelope_volume | 63111 ų |
| shell_volume | 24469 ų |
| envelope_diameter | 66.8 Å |
| shell_rg | 27.99 Å |
| envelope_rg | 20.91 Å |
| shape_rg | 21.03 Å |
| total_rg | 21.83 Å |
| total_atoms | 3068 |
| n_residues | 386 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 66.0 Å |
| rg_real | 21.83 Å |
| rg_real_error | 0.29 Å |
| i0_real | 3.4310e+07 |
| i0_real_error | 4.3920e+05 |
| rg_reciprocal | 21.87 Å |
| i0_reciprocal | 34310000.0000 |
| total_estimate | 0.9112 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 28.6 Å |
| skewness | 0.071 |
| kurtosis | -0.557 |
| angular_range | — – 0.3600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 6099000.0000 |
| n_real_points | 68 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.952; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.995 |