9uas

PSI-LHCE-LHCII from Euglena gracilis

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Photosystem I P700 chlorophyll a apoprotein A2

物种未注明

UniProt P19431

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PSAB_EUGGR
Isoform —
PDB实体 1
链与序列区间 作者链 B; PDB构建体 1–734; UniProt 1–734

Photosystem I iron-sulfur center

物种未注明

UniProt P31556

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PSAC_EUGGR
Isoform —
PDB实体 2
链与序列区间 作者链 C; PDB构建体 1–81; UniProt 1–81

Lhce5.7

物种未注明

UniProt A8HPC6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A8HPC6_EUGGR
Isoform —
PDB实体 6, 7, 11
链与序列区间 作者链 G; PDB构建体 1–184; UniProt 378–561 作者链 P; PDB构建体 1–184; UniProt 378–561 作者链 H; PDB构建体 1–185; UniProt 8–192 作者链 L; PDB构建体 1–187; UniProt 193–379 作者链 R; PDB构建体 1–187; UniProt 193–379

Lhce5

物种未注明

UniProt A8HPD7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A8HPD7_EUGGR
Isoform —
PDB实体 8
链与序列区间 作者链 I; PDB构建体 1–184; UniProt 64–247 作者链 N; PDB构建体 1–184; UniProt 64–247

PsaM

物种未注明

UniProt P31479

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PSAM_EUGGR
Isoform —
PDB实体 12
链与序列区间 作者链 M; PDB构建体 1–31; UniProt 1–31

Lhce10

物种未注明

UniProt A8HPE4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A8HPE4_EUGGR
Isoform —
PDB实体 14, 15
链与序列区间 作者链 S; PDB构建体 1–180; UniProt 70–249 作者链 T; PDB构建体 1–173; UniProt 614–786

LhcbM4.6

物种未注明

UniProt A8HPH1

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.10 × 1 LhcbM2 × 1 (Q39725) LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A8HPH1_EUGGR
Isoform —
PDB实体 16
链与序列区间 作者链 U; PDB构建体 1–209; UniProt 151–359

LhcbM2

物种未注明

UniProt Q39725

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 24 Photosystem I P700 chlorophyll a apoprotein A2 × 1 (P19431) Photosystem I iron-sulfur center × 1 (P31556) PsaD × 1 PsaE × 1 PsaF × 1 Lhce5.7 × 2 (A8HPC6) Lhce7.3 × 1 (A8HPC6) Lhce5 × 2 (A8HPD7) PsaJ × 1 LhcE6 × 2 Lhce8 × 2 (A8HPC6) PsaM × 1 (P31479) LhcE7 × 1 Lhce10 × 1 (A8HPE4) Lhce11 × 1 (A8HPE4) LhcbM4.6 × 1 (A8HPH1) LhcbM4.10 × 1 LhcbM8 × 1 PsaA × 1 BETA-CAROTENE × 12 CHLOROPHYLL A × 279 PHYLLOQUINONE × 2 (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol × 42 DIGALACTOSYL DIACYL GLYCEROL (DGDG) × 3 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 23 DODECYL-ALPHA-D-MALTOSIDE × 36 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 21 IRON/SULFUR CLUSTER × 3 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL × 4 CHLOROPHYLL B × 8 ;(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ; × 2 CHLOROPHYLL A ISOMER × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q39725_EUGGR
Isoform —
PDB实体 18
链与序列区间 作者链 W; PDB构建体 1–228; UniProt 356–583

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id9uas
沉积日期 deposition_date2025-04-01
结构标题 titlePSI-LHCE-LHCII from Euglena gracilis
关键词 keywordsPSI, LHCE, Euglena gracilis, PHOTOSYNTHESIS; PHOTOSYNTHESIS
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

9uas__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

9uas__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

9uas__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)72.32 Å
Rg(电子密度)71.70 Å
总 Rg71.34 Å
原子数60137
残基数4954
排除体积1129200 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 9uas__assembly_1__model_1 24-meric (24) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (33)

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7. 引用文献 (1)