Mogamulizumab in complex with CCR4 N-terminus peptide (N2-C29)

entry_id	9ulm
deposition_date	2025-04-20
last_revision	2026-04-22
title	Mogamulizumab in complex with CCR4 N-terminus peptide (N2-C29)
keywords	mogamulizumab, CCR4, antibody, IMMUNE SYSTEM; IMMUNE SYSTEM
method	X-RAY DIFFRACTION

rg_guinier	37.61 Å
rg_electron	37.03 Å
i0	228121000.00
molecular_weight	120270.0 kDa
excluded_volume	149730 ų
envelope_volume	202790 ų
shell_volume	46939 ų
envelope_diameter	123.9 Å
shell_rg	41.98 Å
envelope_rg	35.93 Å
shape_rg	37.02 Å
total_rg	37.41 Å
total_atoms	8481
n_residues	1105
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	123.1 Å
rg_real	37.56 Å
rg_real_error	1.09 Å
i0_real	2.2810e+08
i0_real_error	4.4020e+06
rg_reciprocal	37.60 Å
i0_reciprocal	228100000.0000
total_estimate	0.8963
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	46.9 Å
skewness	0.249
kurtosis	-0.461
angular_range	— – 0.2100 Å−1
current_alpha	0.0000
highest_alpha	13740000.0000
n_real_points	43
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.910; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.919

Unit Cell

length_a	65.390 Å
length_b	71.190 Å
length_c	73.450 Å
angle_alpha	81.24 °
angle_beta	64.41 °
angle_gamma	71.05 °
z_pdb	2

Symmetry

space_group	P 1
int_tables_number	1
crystal_system	—

Refinement

resolution	2.010 Å
resolution_low	29.550 Å
r_factor	0.1989
r_work	0.1965
r_free	0.2440

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/ul/9ulm/pr_distribution.json
• pr_output /app/data/pr_computation/ul/9ulm/9ulm.pr.out
• pr_plot /app/data/visualization/pr_computation/ul/9ulm/9ulm_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/ul/9ulm/9ulm.dat
• saxs_fit /app/data/saxs_computation/ul/9ulm/9ulm.fit
• saxs_log /app/data/saxs_computation/ul/9ulm/9ulm.log
• saxs_plot /app/data/visualization/saxs_computation/ul/9ulm/9ulm_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/ul/9ulm/9ulm.fit
pddf	/app/data/pr_computation/ul/9ulm/9ulm.pr.out
profile	/app/data/saxs_computation/ul/9ulm/9ulm.dat