9v28

Cryo- EM structure of small subunit (head) of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

40S ribosomal protein S25

物种未注明

UniProt C4M9F4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4M9F4_ENTH1
Isoform —
PDB实体 1
链与序列区间 作者链 sA; PDB构建体 1–137; UniProt 1–137

40S ribosomal protein S28, putative

物种未注明

UniProt C4LZQ8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4LZQ8_ENTH1
Isoform —
PDB实体 2
链与序列区间 作者链 sD; PDB构建体 1–69; UniProt 1–69

Ribosomal protein S29, putative

物种未注明

UniProt C4LW10

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4LW10_ENTH1
Isoform —
PDB实体 3
链与序列区间 作者链 sE; PDB构建体 1–56; UniProt 1–56

40S ribosomal protein S3

物种未注明

UniProt C4LT02

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4LT02_ENTH1
Isoform —
PDB实体 5
链与序列区间 作者链 sd; PDB构建体 1–244; UniProt 1–244

Small ribosomal subunit protein uS7

物种未注明

UniProt O15587

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RS5_ENTH1
Isoform —
PDB实体 6
链与序列区间 作者链 sg; PDB构建体 1–206; UniProt 1–206

40S ribosomal protein S10, putative

物种未注明

UniProt C4LVC0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4LVC0_ENTH1
Isoform —
PDB实体 7
链与序列区间 作者链 sl; PDB构建体 1–127; UniProt 1–127

40S ribosomal protein S15, putative

物种未注明

UniProt C4M7H3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4M7H3_ENTH1
Isoform —
PDB实体 8
链与序列区间 作者链 sq; PDB构建体 1–144; UniProt 1–144

40S ribosomal protein S16, putative

物种未注明

UniProt C4M2R7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4M2R7_ENTH1
Isoform —
PDB实体 9
链与序列区间 作者链 ss; PDB构建体 1–158; UniProt 1–158

40S ribosomal protein S17, putative

物种未注明

UniProt C4M0Z2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4M0Z2_ENTH1
Isoform —
PDB实体 10
链与序列区间 作者链 st; PDB构建体 1–117; UniProt 1–117

Small ribosomal subunit protein uS13

物种未注明

UniProt P48151

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein eS19 × 1 (O15631) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RS18_ENTH1
Isoform —
PDB实体 11
链与序列区间 作者链 su; PDB构建体 1–155; UniProt 1–155

Small ribosomal subunit protein eS19

物种未注明

UniProt O15631

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) 40S ribosomal protein S20, putative × 1 (C4M5V7) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RS19_ENTH1
Isoform —
PDB实体 12
链与序列区间 作者链 sv; PDB构建体 1–155; UniProt 1–155

40S ribosomal protein S20, putative

物种未注明

UniProt C4M5V7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 12 RNA 1 40S ribosomal protein S25 × 1 (C4M9F4) 40S ribosomal protein S28, putative × 1 (C4LZQ8) Ribosomal protein S29, putative × 1 (C4LW10) 17S rRNA × 1 40S ribosomal protein S3 × 1 (C4LT02) Small ribosomal subunit protein uS7 × 1 (O15587) 40S ribosomal protein S10, putative × 1 (C4LVC0) 40S ribosomal protein S15, putative × 1 (C4M7H3) 40S ribosomal protein S16, putative × 1 (C4M2R7) 40S ribosomal protein S17, putative × 1 (C4M0Z2) Small ribosomal subunit protein uS13 × 1 (P48151) Small ribosomal subunit protein eS19 × 1 (O15631) 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 C4M5V7_ENTH1
Isoform —
PDB实体 13
链与序列区间 作者链 sw; PDB构建体 1–118; UniProt 1–118

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id9v28
沉积日期 deposition_date2025-05-19
最后修订 last_revision2025-10-08
结构标题 titleCryo- EM structure of small subunit (head) of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica
关键词 keywordsSSU-head of 75S Ribosome, A/P-tRNA, P/E-tRNA, Entamoeba histolytica, Ribosome; RIBOSOME
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

9v28__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

9v28__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

9v28__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)40.86 Å
Rg(电子密度)41.04 Å
总 Rg41.31 Å
原子数19649
残基数1671
排除体积314900 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 9v28__assembly_1__model_1 tridecameric (13) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (13)

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7. 引用文献 (1)