SAXSdb — 9v75

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1. Structure Basics

entry_id	9v75
deposition_date	2025-05-27
title	Psl polysaccharide related protein structures
keywords	complex, PROTEIN TRANSPORT; PROTEIN TRANSPORT
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	— Å
rg_electron	117.50 Å
i0	8502920000.00
molecular_weight	793640.0 kDa
excluded_volume	999960 Å³
envelope_volume	1789300 Å³
shell_volume	152330 Å³
envelope_diameter	389.7 Å
shell_rg	68.05 Å
envelope_rg	114.30 Å
shape_rg	117.50 Å
total_rg	117.00 Å
total_atoms	55896
n_residues	7128
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	324.5 Å
rg_real	108.40 Å
rg_real_error	2.11 Å
i0_real	8.2100e+09
i0_real_error	2.0290e+08
rg_reciprocal	94.93 Å
i0_reciprocal	8000000000.0000
total_estimate	0.8471
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	74.9 Å
skewness	0.496
kurtosis	-0.799
angular_range	— – 0.0650 Å⁻¹
current_alpha	0.6594
highest_alpha	212800000.0000
n_real_points	14
gnom_version	4.1.3
quality_criteria	AN1: 0.001; Oscil: 0.703; Stabil: 0.961; Sysdev: 1.000; Positv: 1.000; Valcen: 0.964; Smooth: 0.060

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

Entity 1 polymer

description	Biofilm formation protein PslE
formula_weight	74543.5 kDa
ec_number	2.7.10.-
src_method	man
entity_count	8

Polymer

type	polypeptide(L)
strand_id	A,B,D,F,H,J,L,N
atom_count	55896

MIEIRSLRDLLRLLFIYQREFKLAALSAVVIIVLGAFLLPAKYESNARLLVKPGRDSTLPIEISNRQALVMPSTQRDPIVDEERLLTGRPIVRQVAERYLEVLANRPPPEGLWKRTKFYVKKAIGAVFDGIRVTLETFGVIEETTAVERLAKDLEKKFEVTHAAGSTVMEISFTWSEPEVAQEVVKAWIEIYMEERTQALGRKSLYAFYEAQTADSAAQIKSYKAQILKHLNEIGASSIEDRLQDLSERINVLRGERFNSIRLIASSDSALESTRQQLKGLPREIVTVRQIALNPAQQDLRRLLNQKRLERADMMRTYTDDAPPVKALDASIRALEKEVQDEGATVQSSEDRAPNTLTTHLERVLLDETSNNAALRTQLAEQEKQLAELEAQRREALDIEPTLARLQRELNATERNYALYVDSLEKSRIDRELDKSQISNISVIEEATYNPGRIFPKTLLMLFLAVPFGLAVGLLVVYLCYLLDQRIHDGGLVEEKFGLPLWTTLPELSNSTAESSNAFTASICRLYGLLPYARIEEKGLTLGLTSARHGEGVTFIIEQLRRLLEENGVRVRIGGEPAQPGEVVLLDAPALLDSCEAFIALRRADLIALVVEAQKSTVPVVEHALTILTTAFGKVDGIIINRRRFEVPSKVLQTIARYRSAF

Source

organism	Pseudomonas aeruginosa
ncbi_taxonomy_id	287
host_organism	Escherichia coli

Entity 2 polymer

description	Biofilm formation protein PslD
formula_weight	27938.2 kDa
src_method	man
entity_count	8

Polymer

type	polypeptide(L)
strand_id	C,E,G,I,K,M,O,P

MKRTLLMLAMLALAACNTPARIPAPDSDTVDSGKRALEELARLPPAMERVRVGDTLRIVRDAGEMPTLSAFNVATIYELTLYTVLNDGSIYYPFIGRIQAAHRTPQEIANELTTKLAPIYREPRVTVNINQAPGNTVFVGGAVRNPSAVPIPAANNMEQAILGAGGILPVGDARRVALMREDSEGRYHAYFLDFSQLMKIGPEGRKPLAMQRGDIVFVPKSMVGDRIEGVDVYLNQLLPFAKSIGVGVSYTVNNDR

Source

organism	Pseudomonas aeruginosa
ncbi_taxonomy_id	287
host_organism	Escherichia coli

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	2.89 Å
resolution_method	—
num_particles	116722

fit	/app/data/saxs_computation/v7/9v75/9v75.fit
pddf	/app/data/pr_computation/v7/9v75/9v75.pr.out
profile	/app/data/saxs_computation/v7/9v75/9v75.dat

Psl polysaccharide related protein structures

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

EM 3D

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)