9v9b
Crystal structure of the periplasmic domain of Campylobacter jejuni CadF R268E
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9v9b |
| deposition_date | 2025-05-30 |
| last_revision | 2026-05-06 |
| title | Crystal structure of the periplasmic domain of Campylobacter jejuni CadF R268E |
| keywords | CadF, Campylobacter jejuni, peptidoglycan, PEPTIDE BINDING PROTEIN; PEPTIDE BINDING PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.25 Å |
| rg_electron | 14.10 Å |
| i0 | 3715040.00 |
| molecular_weight | 12725.0 kDa |
| excluded_volume | 15531 ų |
| envelope_volume | 17572 ų |
| shell_volume | 10967 ų |
| envelope_diameter | 48.8 Å |
| shell_rg | 19.27 Å |
| envelope_rg | 14.46 Å |
| shape_rg | 14.07 Å |
| total_rg | 15.20 Å |
| total_atoms | 895 |
| n_residues | 113 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 49.2 Å |
| rg_real | 15.22 Å |
| rg_real_error | 0.24 Å |
| i0_real | 3.7150e+06 |
| i0_real_error | 4.2520e+04 |
| rg_reciprocal | 15.22 Å |
| i0_reciprocal | 3715000.0000 |
| total_estimate | 0.9035 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 17.4 Å |
| skewness | 0.263 |
| kurtosis | -0.404 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 521500.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.918; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.998 |