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9wps

Solution structure of the complex between the UBA-like domain of mouse HBS1L and ubiquitin

Method: SOLUTION NMR D_max: 60.2 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9wps
deposition_date	2025-09-09
title	Solution structure of the complex between the UBA-like domain of mouse HBS1L and ubiquitin
keywords	;HBS1L, Ubiqutin, ribosome-associated quality control trigger, Structural Genomics, PSI-2, Protein Structure Initiative, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSLATION ;; TRANSLATION
method	SOLUTION NMR

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	22.47 Å
rg_electron	21.88 Å
i0	1970610000.00
molecular_weight	360840.0 kDa
excluded_volume	446380 Å³
envelope_volume	131380 Å³
shell_volume	33987 Å³
envelope_diameter	132.7 Å
shell_rg	36.97 Å
envelope_rg	37.97 Å
shape_rg	21.91 Å
total_rg	22.09 Å
total_atoms	50460
n_residues	3320
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	60.2 Å
rg_real	19.97 Å
rg_real_error	0.16 Å
i0_real	1.8610e+09
i0_real_error	1.8250e+07
rg_reciprocal	23.09 Å
i0_reciprocal	1970000000.0000
total_estimate	0.6740
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	20.1 Å
skewness	0.480
kurtosis	-0.309
angular_range	— – 0.3550 Å⁻¹
current_alpha	1.6690
highest_alpha	1613000.0000
n_real_points	67
gnom_version	4.1.3
quality_criteria	AN1: 0.009; Oscil: 0.937; Stabil: 0.994; Sysdev: 0.000; Positv: 1.000; Valcen: 0.973; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

Entity 1 polymer

description	HBS1-like protein
formula_weight	8975.8 kDa
ec_number	3.6.5.-
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	50460

GSSGSSGEYGYEDLRESSNSLLNHQLSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSSG

Source

organism	Mus musculus
common_name	house mouse
ncbi_taxonomy_id	10090
host_organism	Cell-free gateway cloning vector N-term 8xHis pCellFree_G01

Entity 2 polymer

description	Ubiquitin-ribosomal protein eS31 fusion protein
formula_weight	9096.3 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B

GSSGSSGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Cell-free gateway cloning vector N-term 8xHis pCellFree_G01

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6. Citations (1)

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fit	/app/data/saxs_computation/wp/9wps/9wps.fit
pddf	/app/data/pr_computation/wp/9wps/9wps.pr.out
profile	/app/data/saxs_computation/wp/9wps/9wps.dat

Solution structure of the complex between the UBA-like domain of mouse HBS1L and ubiquitin

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)