← Back to search
9ypi

MboA HDO apo structure

Method: X-RAY DIFFRACTION Dmax: 93.1 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9ypi

P(r) Distribution

P(r) distribution for 9ypi

1. Structure Basics

entry_id9ypi
deposition_date2025-10-14
titleMboA HDO apo structure
keywordsHeme-oxygenase like domain containing enzyme, HDO, Di-iron oxidase, alkynase, BIOSYNTHETIC PROTEIN; BIOSYNTHETIC PROTEIN
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier31.02
rg_electron29.94
i0173686000.00
molecular_weight105110.0 kDa
excluded_volume131240 ų
envelope_volume162800 ų
shell_volume43738 ų
envelope_diameter98.8
shell_rg38.53
envelope_rg29.84
shape_rg29.96
total_rg30.63
total_atoms7363
n_residues926
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax93.1
rg_real30.83
rg_real_error0.45
i0_real1.7370e+08
i0_real_error2.4790e+06
rg_reciprocal30.92
i0_reciprocal173700000.0000
total_estimate0.9087
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary40.1
skewness0.125
kurtosis-0.546
angular_range— – 0.2550 −1
current_alpha0.0000
highest_alpha45960000.0000
n_real_points52
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.964; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.927

4. Crystallography & Experiment

5. Entities & Polymer Info (6)

6. Citations (1)

7. Files & Curves (10)