Current Protein Identity:A0A0A0GPI6 New Search
Main Difference Dimensions in This Set
Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
6Z9Q Transcription termination intermediate complex 2 Deposited 2020-06-04 Assembly 1 Other combination Heteromer;Protein × 13 PDB declaration: hexadecameric(16) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 5 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.70 Å
6Z9S Transcription termination intermediate complex 4 Deposited 2020-06-04 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 5 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7ADB Transcription termination intermediate complex 1 delta NusG Deposited 2020-09-14 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded BEF BERYLLIUM TRIFLUORIDE ION × 5 ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
7ADC Transcription termination intermediate complex 3 delta NusG Deposited 2020-09-14 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 5 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å
7ADD Transcription termination intermediate complex IIIa Deposited 2020-09-14 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 5 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.30 Å
7ADE Transcription termination complex IVa Deposited 2020-09-14 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 5 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 5 ZN ZINC ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.20 Å
8E3H Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part Deposited 2022-08-17 Assembly 1 Protein–RNA Homooligomer;Protein × 6 PDB declaration: heptameric(7) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.9
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 6.50 Å
8E5L Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part Deposited 2022-08-22 Assembly 1 Protein–RNA Homooligomer;Protein × 6 PDB declaration: heptameric(7) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.9
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.20 Å
8E5P Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part Deposited 2022-08-22 Assembly 1 Protein–RNA Homooligomer;Protein × 6 PDB declaration: heptameric(7) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.9
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.40 Å
8E6W Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part Deposited 2022-08-23 Assembly 1 Protein–RNA Homooligomer;Protein × 6 PDB declaration: heptameric(7) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.9
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.27 Å
8E70 Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part Deposited 2022-08-23 Assembly 1 Protein–DNA Homooligomer;Protein × 6 PDB declaration: heptameric(7) Consistent with all polymers
Chain a 25–443(419 aa)
Chain b 25–443(419 aa)
Chain c 25–443(419 aa)
Chain d 25–443(419 aa)
Chain e 25–443(419 aa)
Chain f 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 6 BEF BERYLLIUM TRIFLUORIDE ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.9
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.10 Å
8PEU Rho-ATPgS-Psu complex III Deposited 2023-06-15 Assembly 1 Protein heterocomplex Heteromer;Protein × 24 PDB declaration: 24-meric(24) Consistent with protein count
Chain A 25–443(419 aa)
Chain B 25–443(419 aa)
Chain C 25–443(419 aa)
Chain D 25–443(419 aa)
Chain E 25–443(419 aa)
Chain F 25–443(419 aa)
Chain I 25–443(419 aa)
Chain J 25–443(419 aa)
Chain K 25–443(419 aa)
Chain L 25–443(419 aa)
Chain M 25–443(419 aa)
Chain N 25–443(419 aa)
Not recorded AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 10 MG MAGNESIUM ION × 10 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 3.70 Å
8PEW Rho-ATPgS-Psu complex III expanded Deposited 2023-06-15 Assembly 1 Protein heterocomplex Heteromer;Protein × 34 PDB declaration: 34-meric(34) Consistent with protein count
Chain A 25–443(419 aa)
Chain B 25–443(419 aa)
Chain C 25–443(419 aa)
Chain D 25–443(419 aa)
Chain E 25–443(419 aa)
Chain F 25–443(419 aa)
Chain G 25–443(419 aa)
Chain H 25–443(419 aa)
Chain I 25–443(419 aa)
Chain J 25–443(419 aa)
Chain K 25–443(419 aa)
Chain L 25–443(419 aa)
Chain M 25–443(419 aa)
Chain N 25–443(419 aa)
Chain O 25–443(419 aa)
Chain P 25–443(419 aa)
Chain X 25–443(419 aa)
Chain Y 25–443(419 aa)
Not recorded AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 16 MG MAGNESIUM ION × 16 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 4.30 Å
8Q3N Bacterial transcription termination factor Rho + ADP Deposited 2023-08-04 Assembly 1 Protein homooligomer Homooligomer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 25–443(419 aa)
Chain B 25–443(419 aa)
Chain C 25–443(419 aa)
Chain D 25–443(419 aa)
Chain E 25–443(419 aa)
Chain F 25–443(419 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
8Q3O Bacterial transcription termination factor Rho + pppGpp Deposited 2023-08-04 Assembly 1 Protein homooligomer Homooligomer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 25–443(419 aa)
Chain B 25–443(419 aa)
Chain C 25–443(419 aa)
Chain D 25–443(419 aa)
Chain E 25–443(419 aa)
Chain F 25–443(419 aa)
Not recorded 0O2 guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) × 4 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å