Current Protein Identity:A0A6A5Q4M4 New Search
Main Difference Dimensions in This Set
Different construct Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3D29 Proteasome Inhibition by Fellutamide B Deposited 2008-05-07 Assembly 1 Protein heterocomplex Heteromer;Protein × 34 PDB declaration: 34-meric(34) Consistent with protein count
Chain F 5–248(244 aa)
Chain T 5–248(244 aa)
Not recorded HXD (3R)-3-HYDROXYDODECANOIC ACID × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;298 K;10 % MPD; 0,1 M MES, 30 mM MgAc2, pH 6,8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 2.60 Å R-free 0.266
7O2L Yeast 20S proteasome in complex with the covalently bound inhibitor b-lactone (2R,3S)-3-isopropyl-4-oxo-2-oxetane-carboxylate (IOC) Deposited 2021-03-30 Assembly 1 Protein heterocomplex Heteromer;Protein × 28 PDB declaration: 28-meric(28) Consistent with protein count
Chain F 1–288(288 aa)
Chain T 1–288(288 aa)
Not recorded MG MAGNESIUM ION × 8 CL CHLORIDE ION × 2 V08 (2 {R},3 {S})-3-methanoyl-4-methyl-2-hydroxy-pentanoic acid × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;20 mM MgAC2, 13% MPD, 0.1 M MES
Resolution 3.00 Å R-free 0.216
7QO6 26S proteasome Rpt1-RK -Ubp6-UbVS complex in the s2 state Deposited 2021-12-23 Assembly 1 Protein heterocomplex Heteromer;Protein × 49 PDB declaration: 49-meric(49) Consistent with protein count
Chain G 1–288(288 aa)
Chain g 1–288(288 aa)
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 5 MG MAGNESIUM ION × 6 ADP ADENOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 6.30 Å
9AW3 Yeast 20S proteasome soaked with MA9 crude extract Deposited 2024-03-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 28 PDB declaration: 28-meric(28) Consistent with protein count
Chain F 2–288(287 aa)
Chain T 2–288(287 aa)
Not recorded MG MAGNESIUM ION × 7 SO4 SULFATE ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;291 K;MES 100 mM pH 5.5-6.9, MPD 8-18% and magnesium acetate 20 mM
Resolution 3.42 Å R-free 0.259
9AW7 Yeast 20S proteasome soaked with isolated TMC-95B Deposited 2024-03-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 28 PDB declaration: 28-meric(28) Consistent with protein count
Chain F 2–288(287 aa)
Chain T 2–288(287 aa)
Not recorded SO4 SULFATE ION × 85 MG MAGNESIUM ION × 12 A1AHA TMC-95B × 6 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1 ACY ACETIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;291 K;MES 100 mM pH 5.5-6.9, MPD 8-18% and magnesium acetate 20 mM
Resolution 2.91 Å R-free 0.232
9C97 Yeast 20S proteasome soaked with BRA-346 fraction Deposited 2024-06-13 Assembly 1 Protein heterocomplex Heteromer;Protein × 28 PDB declaration: 28-meric(28) Consistent with protein count
Chain F 2–288(287 aa)
Chain T 2–288(287 aa)
Not recorded SO4 SULFATE ION × 44 MG MAGNESIUM ION × 9 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 6.9;291 K;MES 100 mM pH 6.9, MPD 25% and magnesium acetate 20 mM
Resolution 3.33 Å R-free 0.252