当前蛋白身份:O88703 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1Q3E HCN2J 443-645 in the presence of cGMP 提交 2003-07-29 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–645(203 aa) 片段:Residues 443-645 (Reference sequence numbering)
未记录 PCG CYCLIC GUANOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 1.90 Å R-free 0.239
1Q3E HCN2J 443-645 in the presence of cGMP 提交 2003-07-29 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 443–645(203 aa) 片段:Residues 443-645 (Reference sequence numbering)
未记录 PCG CYCLIC GUANOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 1.90 Å R-free 0.239
1Q3E HCN2J 443-645 in the presence of cGMP 提交 2003-07-29 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 443–645(203 aa) 片段:Residues 443-645 (Reference sequence numbering)
链 B 443–645(203 aa) 片段:Residues 443-645 (Reference sequence numbering)
未记录 PCG CYCLIC GUANOSINE MONOPHOSPHATE × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 1.90 Å R-free 0.239
1Q43 HCN2I 443-640 in the presence of cAMP, selenomethionine derivative 提交 2003-08-01 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–645(203 aa) 片段:residues 443-645
非标准单体:是(mmCIF未提供具体位点) CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, cAMP, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.00 Å R-free 0.242
1Q43 HCN2I 443-640 in the presence of cAMP, selenomethionine derivative 提交 2003-08-01 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 443–645(203 aa) 片段:residues 443-645
非标准单体:是(mmCIF未提供具体位点) CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, cAMP, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.00 Å R-free 0.242
1Q43 HCN2I 443-640 in the presence of cAMP, selenomethionine derivative 提交 2003-08-01 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 443–645(203 aa) 片段:residues 443-645
链 B 443–645(203 aa) 片段:residues 443-645
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, cAMP, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.00 Å R-free 0.242
1Q43 HCN2I 443-640 in the presence of cAMP, selenomethionine derivative 提交 2003-08-01 Assembly 4 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 443–645(203 aa) 片段:residues 443-645
非标准单体:是(mmCIF未提供具体位点) CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, cAMP, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.00 Å R-free 0.242
1Q5O HCN2J 443-645 in the presence of cAMP, selenomethionine derivative 提交 2003-08-08 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–645(203 aa) 片段:Residues 443-645
非标准单体:是(mmCIF未提供具体位点) CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;PEG 400, sodium citrate, sodium chloride, DTT, HEPES, cAMP, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.30 Å R-free 0.261
2Q0A Structure and rearrangements in the carboxy-terminal region of SpIH channels 提交 2007-05-21 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–640(198 aa) 片段:C-TERMINAL DOMAIN (residues 443-640)
突变:I636D PCG CYCLIC GUANOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;10 % w/v PEG 8000, 0.5 M NaCl, 15 % Glycerol, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.25 Å R-free 0.261
2Q0A Structure and rearrangements in the carboxy-terminal region of SpIH channels 提交 2007-05-21 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 443–640(198 aa) 片段:C-TERMINAL DOMAIN (residues 443-640)
突变:I636D PCG CYCLIC GUANOSINE MONOPHOSPHATE × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;10 % w/v PEG 8000, 0.5 M NaCl, 15 % Glycerol, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.25 Å R-free 0.261
2Q0A Structure and rearrangements in the carboxy-terminal region of SpIH channels 提交 2007-05-21 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 443–640(198 aa) 片段:C-TERMINAL DOMAIN (residues 443-640)
链 B 443–640(198 aa) 片段:C-TERMINAL DOMAIN (residues 443-640)
突变:I636D 突变:I636D PCG CYCLIC GUANOSINE MONOPHOSPHATE × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;10 % w/v PEG 8000, 0.5 M NaCl, 15 % Glycerol, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.25 Å R-free 0.261
2Q0A Structure and rearrangements in the carboxy-terminal region of SpIH channels 提交 2007-05-21 Assembly 4 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 443–640(198 aa) 片段:C-TERMINAL DOMAIN (residues 443-640)
突变:I636D PCG CYCLIC GUANOSINE MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;10 % w/v PEG 8000, 0.5 M NaCl, 15 % Glycerol, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.25 Å R-free 0.261
3BPZ HCN2-I 443-460 E502K in the presence of cAMP 提交 2007-12-19 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–640(198 aa) 片段:ligand biding domain (residues 443-640)
链 B 443–640(198 aa) 片段:ligand biding domain (residues 443-640)
链 C 443–640(198 aa) 片段:ligand biding domain (residues 443-640)
链 D 443–640(198 aa) 片段:ligand biding domain (residues 443-640)
突变:E502K 突变:E502K 突变:E502K 突变:E502K CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;pH 4.6;279 K;PEG 400, SODIUM CITRATE, SODIUM CHLORIDE, DTT, HEPES, 5 mM CAMP, pH 4.6, VAPOR DIFFUSION, temperature 279K
分辨率 1.65 Å R-free 0.216
3ETQ X-ray structure of cysteine-free fragment of mHCN2 C-terminal region from amino acids 443-630 including C508N, C584S, and C601S mutations 提交 2008-10-08 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 443–640(198 aa) 片段:C-terminal fragment
链 B 443–640(198 aa) 片段:C-terminal fragment
突变:C508N, C584S, C601S 突变:C508N, C584S, C601S CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;16% w/v PEG 6000, 500 mM NaCl, 10% glycerol, 100 mM citrate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 1.90 Å R-free 0.216
3FFQ HCN2I 443-640 apo-state 提交 2008-12-04 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–640(198 aa)
未记录 BR BROMIDE ION × 20 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;277 K;Two uL protein (5-7 mg/mL) mixed with one uL reservoir solution composed of 0.4 M NaCl, 0.1 NaBr, 0.1 M MES, pH 6.0, 20% glycerol (v/v), and 20% PEG 8000 (w/v). Crystals grew within eight weeks and harvested an additional eight weeks after initial growth, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.40 Å R-free 0.283
3FFQ HCN2I 443-640 apo-state 提交 2008-12-04 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 443–640(198 aa)
未记录 BR BROMIDE ION × 16 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;277 K;Two uL protein (5-7 mg/mL) mixed with one uL reservoir solution composed of 0.4 M NaCl, 0.1 NaBr, 0.1 M MES, pH 6.0, 20% glycerol (v/v), and 20% PEG 8000 (w/v). Crystals grew within eight weeks and harvested an additional eight weeks after initial growth, VAPOR DIFFUSION, HANGING DROP, temperature 277K
分辨率 2.40 Å R-free 0.283
4EQF Trip8b-1a#206-567 interacting with the carboxy-terminal seven residues of HCN2 提交 2012-04-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 857–863(7 aa) 片段:UNP residues 857-863
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6;298 K;91mM MES, 91mM triSodium citrate, 3.63M NaCL, VAPOR DIFFUSION, SITTING DROP, temperature 298K
分辨率 3.00 Å R-free 0.281
5JON Crystal structure of the unliganded form of HCN2 CNBD 提交 2016-05-02 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 494–640(147 aa)
未记录 NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;34-36% dimethyl PEG 500, 240 mM potassium nitrate, 20 mM magnesium chloride, 100 mM BIS-TRIS, pH 6.0
分辨率 2.04 Å R-free 0.221
5JON Crystal structure of the unliganded form of HCN2 CNBD 提交 2016-05-02 Assembly 2 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 494–640(147 aa)
未记录 NO3 NITRATE ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;293 K;34-36% dimethyl PEG 500, 240 mM potassium nitrate, 20 mM magnesium chloride, 100 mM BIS-TRIS, pH 6.0
分辨率 2.04 Å R-free 0.221
5KHG HCN2 CNBD in complex with cytidine-3', 5'-cyclic monophosphate (cCMP) 提交 2016-06-14 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–643(201 aa) 片段:UNP residues 443-643
非标准单体:是(mmCIF未提供具体位点) CC7 4-amino-1-[(2S,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxidotetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]pyrimidin-2(1H)-one × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;200 mM NaCl, 0.1 mM sodium citrate pH 5.0, 16% PEG 400
分辨率 2.24 Å R-free 0.264
5KHH HCN2 CNBD in complex with inosine-3', 5'-cyclic monophosphate (cIMP) 提交 2016-06-14 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–643(201 aa) 片段:UNP residues 443-643
非标准单体:是(mmCIF未提供具体位点) 6SW Inosine-3',5'-cyclic monophosphate × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;277 K;200 mM NaCl, 0.1 mM sodium citrate pH 5.5, 14.5% PEG 400
分辨率 1.77 Å R-free 0.263
5KHI HCN2 CNBD in complex with purine riboside-3', 5'-cyclic monophosphate (cPuMP) 提交 2016-06-14 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–643(201 aa) 片段:UNP residues 443-643
非标准单体:是(mmCIF未提供具体位点) 6SX Purine riboside-3',5'-cyclic monophosphate × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;277 K;200 mM NaCl, 0.1 mM sodium citrate pH 5.5, 18% PEG 400
分辨率 2.10 Å R-free 0.249
5KHJ HCN2 CNBD in complex with uridine-3', 5'-cyclic monophosphate (cUMP) 提交 2016-06-14 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–643(201 aa) 片段:UNP residues 443-643
链 B 443–643(201 aa) 片段:UNP residues 443-643
未记录 6SY Uridine-3',5'-cyclic monophosphate × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;200 mM NaCl, 0.1 mM sodium citrate pH 4.6, 13% PEG 400
分辨率 2.01 Å R-free 0.252
5KHK HCN2 CNBD in complex with 2-aminopurine riboside-3', 5'-cyclic monophosphate (2-NH2-cPuMP) 提交 2016-06-14 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 443–643(201 aa) 片段:UNP residues 443-643
非标准单体:是(mmCIF未提供具体位点) 6SZ 2-Aminopurine riboside-3',5'-cyclic monophosphate × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.6;277 K;200 mM NaCl, 0.1 mM sodium citrate pH 4.6, 12% PEG 400
分辨率 2.07 Å R-free 0.261
9R1T Structure of the human chimera HCN112 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP. 提交 2025-04-28 Assembly 1 信息不足 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 444–647(204 aa)
链 B 444–647(204 aa)
链 C 444–647(204 aa)
链 D 444–647(204 aa)
未记录 CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.34 Å