Current Protein Identity：O95166
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1GNU GABA(A) receptor associated protein GABARAP Deposited 2001-10-09 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | NI NICKEL (II) ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 8.5；18MG/ML GABARAP, 50MM TRIS PH8.5, 0.25M NACL,10%(W/V) PEGMONO, pH 8.50
|
Resolution 1.75 Å R-free 0.230 |
| 1KLV Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor associated protein Deposited 2001-12-13 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR |
NMR measurement conditions
pH 6.5；298 K；Ionic strength (raw mmCIF value) 340；Pressure 1
NMR sample composition
1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition
1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 100% D2O | 100% D2O
|
Resolution not provided |
| 1KM7 Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein Deposited 2001-12-14 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR |
NMR measurement conditions
pH 6.5；298 K；Ionic strength (raw mmCIF value) 340；Pressure 1
NMR sample composition
1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition
1mM GABARAP, 20mM phosphate buffer NA, 50mM NaCl, 0.02mM NaN3, 100% D2O | 100% D2O
|
Resolution not provided |
| 1KOT Solution Structure of Human GABA Receptor Associated Protein GABARAP Deposited 2001-12-22 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR |
NMR measurement conditions
pH 6.9；298 K；Ionic strength (raw mmCIF value) 100mM NaCl 100mM KCl；Pressure ambient
NMR sample composition
0.8mM GABARAP U-15N,13C;
25mM sodium oxalate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
5% D2O, 95% H2O | 95% H2O/5% D2O
NMR sample composition
0.8mM GABARAP U-15N,13C;
25mM sodium phosphate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
100% D2O | 100% D2O
|
Resolution not provided |
| 3D32 Complex of GABA(A) receptor-associated protein (GABARAP) with a synthetic peptide Deposited 2008-05-09 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | NA SODIUM ION × 1 CL CHLORIDE ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.9；285 K；30 % (w/v) PEG3350
800 mM NaCl
50 mM MES, pH 5.9, VAPOR DIFFUSION, temperature 285K
|
Resolution 1.30 Å R-free 0.195 |
| 3D32 Complex of GABA(A) receptor-associated protein (GABARAP) with a synthetic peptide Deposited 2008-05-09 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | CL CHLORIDE ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；pH 5.9；285 K；30 % (w/v) PEG3350
800 mM NaCl
50 mM MES, pH 5.9, VAPOR DIFFUSION, temperature 285K
|
Resolution 1.30 Å R-free 0.195 |
| 3DOW Complex structure of GABA type A receptor associated protein and its binding epitope on calreticulin Deposited 2008-07-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | ZN ZINC ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；290 K；0.1 M MES, 27% v/v PEG MME 550, 10 mM ZnSO4, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K
|
Resolution 2.30 Å R-free 0.270 |
| 3WIM GABARAP-LIR peptide complex Deposited 2013-09-19 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 5.4；293 K；2M ammonium sulfate, 0.1M sodium citrate, 0.2M potassium sodium tartrate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.60 Å R-free 0.296 |
| 5DPS Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117 Deposited 2015-09-14 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
2–117（116 aa）
Fragment：UNP Q9Y4G2 residues 627-638, UNP O95166 residues 2-117
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；278 K；4% v/v Tacsimate pH 8.0, 12% w/v Polyethylene glycol 3,350
|
Resolution 2.00 Å R-free 0.223 |
| 5DPS Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117 Deposited 2015-09-14 | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
2–117（116 aa）
Fragment：UNP Q9Y4G2 residues 627-638, UNP O95166 residues 2-117
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；278 K；4% v/v Tacsimate pH 8.0, 12% w/v Polyethylene glycol 3,350
|
Resolution 2.00 Å R-free 0.223 |
| 5DPS Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117 Deposited 2015-09-14 | Assembly 3 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain C
2–117（116 aa）
Fragment：UNP Q9Y4G2 residues 627-638, UNP O95166 residues 2-117
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；278 K；4% v/v Tacsimate pH 8.0, 12% w/v Polyethylene glycol 3,350
|
Resolution 2.00 Å R-free 0.223 |
| 6HB9 Crystal structure of the GABARAP in complex with the UBA5 LIR motif Deposited 2018-08-10 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
3–116（114 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；1.6 M sodium phosphate, 0.1 M HEPES, pH7.5
|
Resolution 1.30 Å R-free 0.213 |
| 6HOG Structure of VPS34 LIR motif bound to GABARAP Deposited 2018-09-17 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–112（112 aa）
|
Not recorded | SO4 SULFATE ION × 6 EDO 1,2-ETHANEDIOL × 6 GOL GLYCEROL × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；50 mM HEPES pH 7.1, 40% PEG 600
|
Resolution 1.26 Å R-free 0.181 |
| 6HOH Structure of VPS34 LIR motif (S249E) bound to GABARAP Deposited 2018-09-17 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–112（112 aa）
|
Not recorded | PGE TRIETHYLENE GLYCOL × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；20% PEG 3350, 200 mM magnesium formate
|
Resolution 2.25 Å R-free 0.250 |
| 6HOH Structure of VPS34 LIR motif (S249E) bound to GABARAP Deposited 2018-09-17 | Assembly 2 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain B
1–112（112 aa）
Chain C
1–112（112 aa）
Chain D
1–112（112 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；20% PEG 3350, 200 mM magnesium formate
|
Resolution 2.25 Å R-free 0.250 |
| 6HOJ Structure of Beclin1 LIR motif bound to GABARAP Deposited 2018-09-17 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–112（112 aa）
Chain B
1–112（112 aa）
Chain C
1–112（112 aa）
|
Not recorded | SO4 SULFATE ION × 1 EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；15% PEG 4000, 50 mM Bicine pH 8.8
|
Resolution 1.51 Å R-free 0.211 |
| 6HOK Structure of Beclin1 LIR (S96E) motif bound to GABARAP Deposited 2018-09-17 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–112（112 aa）
|
Not recorded | EDO 1,2-ETHANEDIOL × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；1.6 M ammonium sulfate, 100 mM TRIS pH 8.5, 10 % Glycerol
|
Resolution 1.61 Å R-free 0.198 |
| 6HYL Structure of PCM1 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2 M CaCl2, 0.1 M HEPES pH 7, 20% w/v PEG 6000
|
Resolution 1.56 Å R-free 0.247 |
| 6HYL Structure of PCM1 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2 M CaCl2, 0.1 M HEPES pH 7, 20% w/v PEG 6000
|
Resolution 1.56 Å R-free 0.247 |
| 6HYM Structure of PCM1 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | GOL GLYCEROL × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；25% w/v PEG 1500, 0.1 M SPG pH 8.5
|
Resolution 1.86 Å R-free 0.217 |
| 6HYM Structure of PCM1 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | GOL GLYCEROL × 1 EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；25% w/v PEG 1500, 0.1 M SPG pH 8.5
|
Resolution 1.86 Å R-free 0.217 |
| 6HYN Structure of ATG13 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2M NaCl, 10% PEG 8000, 0.1M Na K phosphate 6.2
|
Resolution 1.14 Å R-free 0.185 |
| 6HYO Structure of ULK1 LIR motif bound to GABARAP Deposited 2018-10-22 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | GOL GLYCEROL × 1 PEG DI(HYDROXYETHYL)ETHER × 6 EDO 1,2-ETHANEDIOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2M MgCl2. 0.1 M Na cacodylate pH 6.5, 20% PEG1000
|
Resolution 1.07 Å R-free 0.161 |
| 6YOP Structure of SAMM50 LIR bound to GABARAP Deposited 2020-04-14 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；20% v/v isopropanol, 0.1 M Na Acetate pH 5.5
|
Resolution 1.10 Å R-free 0.159 |
| 7AA8 Structure of SCOC LIR bound to GABARAP Deposited 2020-09-03 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain C
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；pH 8.4；293 K；2.9% PEG 550 MME,
50 mM Bicine pH 8.4,
30% PEG 1500
|
Resolution 1.25 Å R-free 0.194 |
| 7BRQ Crystal structure of human FAM134B LIR fused to human GABARAP Deposited 2020-03-29 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–116（116 aa）
|
Mutation：F3S,V4T | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.5；293 K；1.91 M ammonium sulfate, 0.1 M sodium citrate pH 5.5, 0.18 M potassium sodium tartrate
|
Resolution 1.40 Å R-free 0.206 |
| 7BRT Crystal structure of Sec62 LIR fused to GABARAP Deposited 2020-03-30 | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–116（116 aa）
Chain B
1–116（116 aa）
|
Mutation：T367D,F3S,V4T Mutation：T367D,F3S,V4T | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；1.5 M ammonium sulfate, 0.1 M Tris pH 8.5
|
Resolution 2.00 Å R-free 0.184 |
| 7BRU Crystal structure of human RTN3 LIR fused to human GABARAP Deposited 2020-03-30 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–116（116 aa）
Chain B
1–116（116 aa）
Chain C
1–116（116 aa）
|
Mutation：F3S,V4T Mutation：F3S,V4T Mutation：F3S,V4T | PO4 PHOSPHATE ION × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；293 K；0.8 M potassium phosphate monobasic, 0.8 M sodium phosphate monobasic, 0.1 M HEPES pH 7.5
|
Resolution 2.15 Å R-free 0.230 |
| 7BV4 Crystal structure of STX17 LIR region in complex with GABARAP Deposited 2020-04-09 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.12M Alcohols, 50% (v/v) Precipitant Mix 4, Buffer System 3 at pH 8.5 in Morpheus screen kit from Molecular Dimension
|
Resolution 2.00 Å R-free 0.225 |
| 7BV4 Crystal structure of STX17 LIR region in complex with GABARAP Deposited 2020-04-09 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.12M Alcohols, 50% (v/v) Precipitant Mix 4, Buffer System 3 at pH 8.5 in Morpheus screen kit from Molecular Dimension
|
Resolution 2.00 Å R-free 0.225 |
| 7BV4 Crystal structure of STX17 LIR region in complex with GABARAP Deposited 2020-04-09 | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain E
1–117（117 aa）
|
Not recorded | PEG DI(HYDROXYETHYL)ETHER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.12M Alcohols, 50% (v/v) Precipitant Mix 4, Buffer System 3 at pH 8.5 in Morpheus screen kit from Molecular Dimension
|
Resolution 2.00 Å R-free 0.225 |
| 7BV4 Crystal structure of STX17 LIR region in complex with GABARAP Deposited 2020-04-09 | Assembly 4 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain G
1–117（117 aa）
|
Not recorded | PEG DI(HYDROXYETHYL)ETHER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.12M Alcohols, 50% (v/v) Precipitant Mix 4, Buffer System 3 at pH 8.5 in Morpheus screen kit from Molecular Dimension
|
Resolution 2.00 Å R-free 0.225 |
| 7EA7 crystal structure of NAP1 LIR in complex with GABARAP Deposited 2021-03-06 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.3 M sodium nitrate, 0.3 M sodium phosphate dibasic, 0.3 M ammonium sulfate, 0.1 M bicine-tris pH 8.5, 25% v/v MPD, 25% PEG1000, 25% w/v PEG3350
|
Resolution 2.69 Å R-free 0.271 |
| 7EA7 crystal structure of NAP1 LIR in complex with GABARAP Deposited 2021-03-06 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；0.3 M sodium nitrate, 0.3 M sodium phosphate dibasic, 0.3 M ammonium sulfate, 0.1 M bicine-tris pH 8.5, 25% v/v MPD, 25% PEG1000, 25% w/v PEG3350
|
Resolution 2.69 Å R-free 0.271 |
| 7LSW Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP Deposited 2021-02-18 | Assembly 1 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
Chain C
1–117（117 aa）
|
Not recorded | SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；291 K；2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, and 2% v/v PEG 550 MME
|
Resolution 3.05 Å R-free 0.247 |
| 7LSW Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP Deposited 2021-02-18 | Assembly 2 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
Chain D
1–117（117 aa）
|
Not recorded | SO4 SULFATE ION × 5 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；291 K；2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, and 2% v/v PEG 550 MME
|
Resolution 3.05 Å R-free 0.247 |
| 7LSW Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP Deposited 2021-02-18 | Assembly 3 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
Chain E
1–117（117 aa）
|
Not recorded | SO4 SULFATE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；291 K；2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, and 2% v/v PEG 550 MME
|
Resolution 3.05 Å R-free 0.247 |
| 7LSW Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP Deposited 2021-02-18 | Assembly 4 Insufficient information Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–117（117 aa）
Chain F
1–117（117 aa）
|
Not recorded | SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；291 K；2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, and 2% v/v PEG 550 MME
|
Resolution 3.05 Å R-free 0.247 |
| 7LT6 Structure of Partial Beta-Hairpin LIR from FNIP2 Bound to GABARAP Deposited 2021-02-18 | Assembly 1 Insufficient information Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
1–117（117 aa）
Chain B
1–117（117 aa）
Chain C
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION；291 K；0.1 M magnesium acetate, 0.1 M MOPS pH 7.5, and 12% v/v PEG 8000
|
Resolution 1.80 Å R-free 0.273 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 10 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain J
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain K
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 12 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain L
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 4 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain D
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 5 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain E
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 6 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain F
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 7 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain G
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 8 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain H
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VEC Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272 Deposited 2021-09-08 | Assembly 9 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain I
1–116（116 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；30% PEG 4000, 0.2M ammonium acetate, 0.1M bis-Tris pH 5.6
|
Resolution 3.00 Å R-free 0.301 |
| 7VED Crystal structure of GABARAP fused to TEX264 LIR with S272D mutation Deposited 2021-09-08 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–116（116 aa）
|
Mutation：S272D,F3S,V4T | SO4 SULFATE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2M potassium sodium tartrate, 0.1M sodium citrate pH 5.6, 2.0M ammonium sulfate
|
Resolution 2.02 Å R-free 0.225 |
| 7VED Crystal structure of GABARAP fused to TEX264 LIR with S272D mutation Deposited 2021-09-08 | Assembly 2 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
1–116（116 aa）
|
Mutation：S272D,F3S,V4T | SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.2M potassium sodium tartrate, 0.1M sodium citrate pH 5.6, 2.0M ammonium sulfate
|
Resolution 2.02 Å R-free 0.225 |
| 7YO9 Crystal structure of fusion protein of human TP53INP2 LIR and human GABARAP Deposited 2022-08-01 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–116（116 aa）
Fragment：Tumor protein p53-inducible nuclear protein 2(1-15), Gamma-aminobutyric acid receptor-associated protein(16-131)
|
Mutation：F18S,V19T | IPA ISOPROPYL ALCOHOL × 1 PO4 PHOSPHATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 4.2；293 K；10% 2-propanol, 0.1 M sodium phosphate/citric acid pH 4.2, 0.2 M lithium sulfate
|
Resolution 1.75 Å R-free 0.216 |
| 7ZKR Human GABARAP in complex with stapled peptide Pen3-ortho Deposited 2022-04-13 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | PO4 PHOSPHATE ION × 3 CL CHLORIDE ION × 1 OXE ORTHO-XYLENE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；293 K；magnesium acetate, sodium cacodylate, PEG 8000
|
Resolution 1.10 Å R-free 0.167 |
| 7ZL7 Human GABARAP in complex with stapled peptide Pen8-ortho Deposited 2022-04-14 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | CL CHLORIDE ION × 4 NA SODIUM ION × 1 OXE ORTHO-XYLENE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；sodium chloride, Tris-HCl, PEG 3000
|
Resolution 1.55 Å R-free 0.220 |
| 7ZL7 Human GABARAP in complex with stapled peptide Pen8-ortho Deposited 2022-04-14 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–117（117 aa）
|
Not recorded | CL CHLORIDE ION × 4 OXE ORTHO-XYLENE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7；293 K；sodium chloride, Tris-HCl, PEG 3000
|
Resolution 1.55 Å R-free 0.220 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
2–116（115 aa）
|
Not recorded | ACT ACETATE ION × 1 GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
2–116（115 aa）
|
Not recorded | ACT ACETATE ION × 1 GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain E
2–116（115 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 4 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain G
2–116（115 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 5 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain I
2–116（115 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 6 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain M
2–116（115 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 7 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain O
2–116（115 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8AFI GABARAP in complex with LIR motif of HsATG3 Deposited 2022-07-18 | Assembly 8 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain K
2–116（115 aa）
|
Not recorded | GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；Sodium acetate, sodium cacodylate, PEG 8,000
|
Resolution 2.66 Å R-free 0.262 |
| 8S1M Crystal structure of human GABARAP fused to EGFR (1076-1099) Deposited 2024-02-15 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | CL CHLORIDE ION × 1 GOL GLYCEROL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5.6；293 K；0.17 M ammonium acetate
0.085 M sodium citrate
25.5% PEG 4000
15% Glycerol
|
Resolution 2.05 Å R-free 0.230 |
| 8T2M Crystal structure of GABARAP in complex with the LIR of NSs4 Deposited 2023-06-06 | Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
Fragment：;GS is the remain of the removed expression tag. The C terminus of Nss 257-265 has been fused with Q9H492 to facilitate the crystalization. The GG is a spacer between Nss and GABARAP protein.
;
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；0.1 M sodium acetate:HCl, pH 4.6, 8% PEG 4000
|
Resolution 1.27 Å R-free 0.178 |
| 8T2N Crystal structure of GABARAP in complex with the LIR of NSs3 Deposited 2023-06-06 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；0.2 M Potassium acetate, 20% PEG 3350
|
Resolution 1.88 Å R-free 0.264 |
| 8T2N Crystal structure of GABARAP in complex with the LIR of NSs3 Deposited 2023-06-06 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；0.2 M Potassium acetate, 20% PEG 3350
|
Resolution 1.88 Å R-free 0.264 |
| 8T31 Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；25% PEG3350, 0.1M Na-citrate, 5% isopropanol
|
Resolution 2.10 Å R-free 0.264 |
| 8T31 Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；25% PEG3350, 0.1M Na-citrate, 5% isopropanol
|
Resolution 2.10 Å R-free 0.264 |
| 8T31 Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain E
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；25% PEG3350, 0.1M Na-citrate, 5% isopropanol
|
Resolution 2.10 Å R-free 0.264 |
| 8T31 Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 4 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain G
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；25% PEG3350, 0.1M Na-citrate, 5% isopropanol
|
Resolution 2.10 Å R-free 0.264 |
| 8T31 Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 5 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain I
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；25% PEG3350, 0.1M Na-citrate, 5% isopropanol
|
Resolution 2.10 Å R-free 0.264 |
| 8T32 Crystal structure of K48 acetylated GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) | PGE TRIETHYLENE GLYCOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；28 % (w/v) PEG 2000 MME, 0.1 M Bis-Tris: HCl, pH 6.5
|
Resolution 2.05 Å R-free 0.271 |
| 8T33 Crystal structure of K46 acetylated GABARAP in complex with the LIR of TP53INP2/DOR Deposited 2023-06-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) | ZN ZINC ION × 9 ACT ACETATE ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293 K；10 % w/v PEG 3000, 0.2 M Zinc acetate dihydrate, 0.1 M Sodium acetate PH 4.5
|
Resolution 1.60 Å R-free 0.212 |
| 8W6A Crystal structure of TAX1BP1 LIR region in complex with GABARAP Deposited 2023-08-28 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；2.8 M Sodium acetate trihydrate and 0.1 M BIS-TRIS propane at pH 7.0
|
Resolution 1.53 Å R-free 0.187 |
| 8W6A Crystal structure of TAX1BP1 LIR region in complex with GABARAP Deposited 2023-08-28 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；2.8 M Sodium acetate trihydrate and 0.1 M BIS-TRIS propane at pH 7.0
|
Resolution 1.53 Å R-free 0.187 |
| 8W6A Crystal structure of TAX1BP1 LIR region in complex with GABARAP Deposited 2023-08-28 | Assembly 3 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain D
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；2.8 M Sodium acetate trihydrate and 0.1 M BIS-TRIS propane at pH 7.0
|
Resolution 1.53 Å R-free 0.187 |
| 8W6A Crystal structure of TAX1BP1 LIR region in complex with GABARAP Deposited 2023-08-28 | Assembly 4 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain G
1–117（117 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；289 K；2.8 M Sodium acetate trihydrate and 0.1 M BIS-TRIS propane at pH 7.0
|
Resolution 1.53 Å R-free 0.187 |
| 9E8P Crystal Structure of GABARAP-ATG3 conjugate Deposited 2024-11-05 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–116（116 aa）
|
Not recorded | SO4 SULFATE ION × 1 EDO 1,2-ETHANEDIOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；277.15 K；0.1 mM Tris pH8.5, 25%(w/v) PEG3550
|
Resolution 2.70 Å R-free 0.249 |
| 9E8P Crystal Structure of GABARAP-ATG3 conjugate Deposited 2024-11-05 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain D
1–116（116 aa）
|
Not recorded | EDO 1,2-ETHANEDIOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；277.15 K；0.1 mM Tris pH8.5, 25%(w/v) PEG3550
|
Resolution 2.70 Å R-free 0.249 |
| 9HGD Crystal structure of human GABARAP in complex with cyclic peptide GAB_D23 Deposited 2024-11-19 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | CL CHLORIDE ION × 2 PGE TRIETHYLENE GLYCOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；293 K；0.1 M MES pH 5, 30% PEG 6000
|
Resolution 1.50 Å R-free 0.222 |
| 9HGD Crystal structure of human GABARAP in complex with cyclic peptide GAB_D23 Deposited 2024-11-19 | Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain C
1–117（117 aa）
|
Not recorded | MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2 TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 5；293 K；0.1 M MES pH 5, 30% PEG 6000
|
Resolution 1.50 Å R-free 0.222 |
| 9I9X Human GABARAP in complex with artificial peptide IM-2 Deposited 2025-02-07 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–117（117 aa）
|
Not recorded | GOL GLYCEROL × 3 DMS DIMETHYL SULFOXIDE × 1 SO4 SULFATE ION × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；ammonium sulfate, sodium cacodylate trihydrate, PEG 8000, DMSO, Tris-HCl, NaCl
|
Resolution 1.42 Å R-free 0.197 |