Current Protein Identity:P00171 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1CYO BOVINE CYTOCHROME B(5) Deposited 1994-08-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 5–97(93 aa)
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.50 Å
1EHB CRYSTAL STRUCTURE OF RECOMBINANT TRYPSIN-SOLUBILIZED FRAGMENT OF CYTOCHROME B5 Deposited 2000-02-20 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 8–89(82 aa) Fragment:TRYPSIN-SOLUBILIZED FRAGMENT
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 8;293 K;phosphate buffer, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.90 Å R-free 0.248
1ES1 CRYSTAL STRUCTURE OF VAL61HIS MUTANT OF TRYPSIN-SOLUBILIZED FRAGMENT OF CYTOCHROME B5 Deposited 2000-04-07 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 8–89(82 aa) Fragment:TRYPSIN-SOLUBILIZED FRAGMENT
Mutation:VAL61HIS HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.10 Å R-free 0.244
1F03 SOLUTION STRUCTURE OF OXIDIZED BOVINE MICROSOMAL CYTOCHROME B5 MUTANT (E44A, E48A, E56A, D60A) AND ITS INTERACTION WITH CYTOCHROME C Deposited 2000-05-14 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa)
Mutation:E44A, E48A, E56A, D60A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;303 K;Ionic strength (raw mmCIF value) 10 mM;Pressure 1
NMR sample composition 6 mM cytochrome b5 mutant 1H | 10 mM phosphate buffer, 90% H2O, 10% D2O
NMR sample composition 6 mM cytochrome b5 mutant 1H | 10 mM phosphate buffer, D2O
Resolution not provided
1F04 SOLUTION STRUCTURE OF OXIDIZED BOVINE MICROSOMAL CYTOCHROME B5 MUTANT (E44A, E48A, E56A, D60A) AND ITS INTERACTION WITH CYTOCHROME C Deposited 2000-05-14 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa)
Mutation:E44A, E48A, E56A, D60A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;303 K;Ionic strength (raw mmCIF value) 10 mM;Pressure 1
NMR sample composition 6 mM cytochrome b5 mutant 1H | 10 mM phosphate buffer , 90% H2O, 10% D2O
NMR sample composition 6 mM cytochrome b5 mutant 1H | 10 mM phosphate buffer, D2O
Resolution not provided
1HKO NMR structure of bovine cytochrome b5 Deposited 2003-03-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–104(104 aa) Fragment:HEME BINDING DOMAIN, RESIDUES 1-104
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;300 K
Resolution not provided
1I5U SOLUTION STRUCTURE OF CYTOCHROME B5 TRIPLE MUTANT (E48A/E56A/D60A) Deposited 2001-02-28 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 8–89(82 aa) Fragment:SOLUBLE DOMAIN (RESIDUES 8-89)
Mutation:E48A/E56A/D60A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;303 K;Pressure 1
NMR measurement conditions pH 7;303 K;Pressure 1
NMR measurement conditions pH 7;303 K;Pressure 1
NMR measurement conditions pH 7;303 K;Pressure 1
NMR sample composition 4mM cytochrome b5 triple mutant(E48A/E56A/D60A) | 90% H2O/10% D2O
Resolution not provided
1J0Q Solution Structure of Oxidized Bovine Microsomal Cytochrome b5 mutant V61H Deposited 2002-11-20 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:Trypsin-Solubilized Fragment
Mutation:V61H HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;293 K;Pressure ambient
NMR sample composition 2.9mM enzyme, pH 7.0, 25mM phosphate buffer | 90% H2O/10% D2O
Resolution not provided
1LQX Crystal structure of V45E mutant of cytochrome b5 Deposited 2002-05-14 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment of cytochrome b5
Mutation:V45E HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 7.5;293 K;PHOSPHATE BUFFER, pH 7.5, VAPOR DIFFUSION, temperature 293.0K
Resolution 1.80 Å R-free 0.222
1LR6 Crystal structure of V45Y mutant of cytochrome b5 Deposited 2002-05-15 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment of cytochrome b5
Mutation:V45Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;PHOSPHATE BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
Resolution 1.90 Å R-free 0.236
1M20 Crystal Structure of F35Y Mutant of Trypsin-solubilized Fragment of Cytochrome b5 Deposited 2002-06-20 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F35Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.80 Å R-free 0.227
1M2I Crystal structure of E44A/E56A mutant of cytochrome b5 Deposited 2002-06-24 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment of cytochrome b5
Mutation:E44A, E56A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 8;293 K;PHOSPHATE BUFFER, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
Resolution 1.80 Å R-free 0.232
1M2M Crystal structure of E44A/E48A/E56A/D60A mutant of cytochrome b5 Deposited 2002-06-24 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment of cytochrome b5
Mutation:E44A, E48A, E56A, D60A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;PHOSPHATE BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.80 Å R-free 0.238
1M59 Crystal Structure of P40V Mutant of Trypsin-solubilized Fragment of Cytochrome b5 Deposited 2002-07-09 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:P40V HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;phosphate buffer, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.90 Å R-free 0.227
1NX7 Solution Structure of Oxidized Bovine Microsomal Cytochrome B5 Deposited 2003-02-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:RESIDUES 3-84
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;300 K;Ionic strength (raw mmCIF value) 25mM Phosphate buffer;Pressure 1
NMR measurement conditions pH 7;298 K;Ionic strength (raw mmCIF value) 25mM Phosphate buffer;Pressure 1
NMR sample composition 3.0mM | 90% H2O/10% D2O
NMR sample composition 3.0mM | 100% D2O
Resolution not provided
1SH4 Solution structure of oxidized bovine microsomal cytochrome B5 Mutant V45H Deposited 2004-02-25 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:residues 3-84
Mutation:V45H HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR
NMR measurement conditions pH 7;293 K;Ionic strength (raw mmCIF value) 25mM PHOSPHATE BUFFER;Pressure 1
NMR sample composition 3.0mM | 90% H2O/10% D2O
NMR sample composition 3.0mM | 100% D2O
Resolution not provided
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 5 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain E 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9M Crystal structure of F58W mutant of cytochrome b5 Deposited 2004-08-10 Assembly 6 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain F 7–88(82 aa) Fragment:trypsin-solubilized fragment
Mutation:F58W HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, dioxane, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.00 Å R-free 0.266
1U9U Crystal structure of F58Y mutant of cytochrome b5 Deposited 2004-08-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 7–88(82 aa) Fragment:Trypsin-solubilized fragment
Mutation:F58Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;phosphate buffer, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.86 Å R-free 0.215
3OZZ Structure of a cytochrome b5 core-swap mutant Deposited 2010-09-27 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 8–89(82 aa) Fragment:N-TERMINAL HEME-BINDING DOMAIN (unp residues 8-89)
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 7;277 K;30% PEG8000, 0.2M MgAc, 0.1M Pipes, pH 7.0, VAPOR DIFFUSION, temperature 277K
Resolution 1.70 Å R-free 0.229
4HIN 2.4A Resolution Structure of Bovine Cytochrome b5 (S71L) Deposited 2012-10-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 8–89(82 aa)
Mutation:S71L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CU COPPER (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 8.5;293 K;20% (w/v) PEG 8000, 100 mM Tris, 200 mM MgCl2, 10 mM CuCl2, pH 8.5, vapor diffusion, temperature 293K
Resolution 2.40 Å R-free 0.245
4HIN 2.4A Resolution Structure of Bovine Cytochrome b5 (S71L) Deposited 2012-10-11 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 8–89(82 aa)
Mutation:S71L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CU COPPER (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 8.5;293 K;20% (w/v) PEG 8000, 100 mM Tris, 200 mM MgCl2, 10 mM CuCl2, pH 8.5, vapor diffusion, temperature 293K
Resolution 2.40 Å R-free 0.245
4HIN 2.4A Resolution Structure of Bovine Cytochrome b5 (S71L) Deposited 2012-10-11 Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain C 8–89(82 aa)
Mutation:S71L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CU COPPER (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 8.5;293 K;20% (w/v) PEG 8000, 100 mM Tris, 200 mM MgCl2, 10 mM CuCl2, pH 8.5, vapor diffusion, temperature 293K
Resolution 2.40 Å R-free 0.245
4HIN 2.4A Resolution Structure of Bovine Cytochrome b5 (S71L) Deposited 2012-10-11 Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain D 8–89(82 aa)
Mutation:S71L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CU COPPER (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 8.5;293 K;20% (w/v) PEG 8000, 100 mM Tris, 200 mM MgCl2, 10 mM CuCl2, pH 8.5, vapor diffusion, temperature 293K
Resolution 2.40 Å R-free 0.245