Current Protein Identity:P02788 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1B0L RECOMBINANT HUMAN DIFERRIC LACTOFERRIN Deposited 1998-11-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–710(691 aa)
Mutation:A10T FE FE (III) ION × 2 CO3 CARBONATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;DIALYSIS AGAINST 10MM SODIUM PHOSPHATE PH 8.0, CONTAINING 10% ETHANOL
Resolution 2.20 Å R-free 0.274
1BKA OXALATE-SUBSTITUTED DIFERRIC LACTOFERRIN Deposited 1996-04-15 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–711(692 aa)
Not recorded FE FE (III) ION × 2 OXL OXALATE ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.40 Å
1CB6 STRUCTURE OF HUMAN APOLACTOFERRIN AT 2.0 A RESOLUTION. Deposited 1999-03-01 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–710(691 aa) Fragment:UNP residues 20-710
Not recorded CL CHLORIDE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions pH 7.8;pH 7.8
Resolution 2.00 Å R-free 0.286
1DSN D60S N-TERMINAL LOBE HUMAN LACTOFERRIN Deposited 1995-12-13 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 21–353(333 aa) Fragment:N-TERMINAL LOBE RESIDUES 1 - 333
Mutation:D60S FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;pH 8.0
Resolution 2.05 Å
1EH3 R210K N-TERMINAL LOBE HUMAN LACTOFERRIN Deposited 2000-02-18 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 15–348(334 aa) Fragment:N-TERMINAL LOBE
Mutation:R210K FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions LIQUID DIFFUSION;pH 8;277 K;HEPES, NaCl, pH 8.0, LIQUID DIFFUSION, temperature 4K
Resolution 2.00 Å R-free 0.250
1FCK STRUCTURE OF DICERIC HUMAN LACTOFERRIN Deposited 2000-07-18 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–711(692 aa)
Not recorded CO3 CARBONATE ION × 2 CE CERIUM (III) ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å R-free 0.257
1H43 R210E N-TERMINAL LOBE HUMAN LACTOFERRIN Deposited 2002-10-02 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–353(334 aa) Fragment:N-TERMINAL LOBE, RESIDUES 20-353
Mutation:YES CO3 CARBONATE ION × 1 FE FE (III) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;HEPES, NACL, pH 8.00
Resolution 2.20 Å R-free 0.235
1H44 R210L N-TERMINAL LOBE HUMAN LACTOFERRIN Deposited 2002-10-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–353(334 aa) Fragment:N-TERMINAL LOBE, RESIDUES 20-353
Mutation:YES FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;HEPES, NACL, pH 8.00
Resolution 2.00 Å R-free 0.241
1H45 R210G N-TERMINAL LOBE HUMAN LACTOFERRIN Deposited 2002-10-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–353(334 aa) Fragment:N-TERMINAL LOBE, RESIDUES 20-353
Mutation:YES FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;HEPES, NACL, pH 8.00
Resolution 1.95 Å R-free 0.248
1HSE H253M N TERMINAL LOBE OF HUMAN LACTOFERRIN Deposited 1996-12-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 21–347(327 aa) Fragment:N-TERMINAL HALF-MOLECULE
Mutation:H253M FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1L5T Crystal Structure of a Domain-Opened Mutant (R121D) of the Human Lactoferrin N-lobe Refined From a Merohedrally-Twinned Crystal Form. Deposited 2002-03-07 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 21–352(332 aa) Fragment:RESIDUES 21-352
Mutation:R121D No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;pH 8;298 K;concentrated solution of the protein (50-80 mg mL-1), 0.01 M Tris-HCl, pH 8.0, 12% (v/v) isopropanol, MICRODIALYSIS, temperature 298K
Resolution 3.00 Å R-free 0.199
1L5T Crystal Structure of a Domain-Opened Mutant (R121D) of the Human Lactoferrin N-lobe Refined From a Merohedrally-Twinned Crystal Form. Deposited 2002-03-07 Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 21–352(332 aa) Fragment:RESIDUES 21-352
Mutation:R121D No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;pH 8;298 K;concentrated solution of the protein (50-80 mg mL-1), 0.01 M Tris-HCl, pH 8.0, 12% (v/v) isopropanol, MICRODIALYSIS, temperature 298K
Resolution 3.00 Å R-free 0.199
1LCF CRYSTAL STRUCTURE OF COPPER-AND OXALATE-SUBSTITUTED HUMAN LACTOFERRIN AT 2.0 ANGSTROMS RESOLUTION Deposited 1994-01-11 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–711(690 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CU COPPER (II) ION × 2 CO3 CARBONATE ION × 1 OXL OXALATE ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1LCT STRUCTURE OF THE RECOMBINANT N-TERMINAL LOBE OF HUMAN LACTOFERRIN AT 2.0 ANGSTROMS RESOLUTION Deposited 1993-06-19 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 21–353(333 aa)
Not recorded FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1LFG Structure of diferric human lactoferrin Deposited 1992-02-05 Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–711(690 aa)
Not recorded FE FE (III) ION × 2 CO3 CARBONATE ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1LFH MOLECULAR REPLACEMENT SOLUTION OF THE STRUCTURE OF APOLACTOFERRIN, A PROTEIN DISPLAYING LARGE-SCALE CONFORMATIONAL CHANGE Deposited 1991-09-04 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–711(690 aa)
Not recorded CL CHLORIDE ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.80 Å
1LFI METAL SUBSTITUTION IN TRANSFERRINS: THE CRYSTAL STRUCTURE OF HUMAN COPPER-LACTOFERRIN AT 2.1 ANGSTROMS RESOLUTION Deposited 1992-02-10 Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–711(690 aa)
Not recorded CU COPPER (II) ION × 2 CO3 CARBONATE ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.10 Å
1LGB INTERACTION OF A LEGUME LECTIN WITH THE N2 FRAGMENT OF HUMAN LACTOTRANSFERRIN OR WITH THE ISOLATED BIANTENNARY GLYCOPEPTIDE: ROLE OF THE FUCOSE MOIETY Deposited 1994-01-07 Assembly 1 Other combination Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain C 111–269(159 aa)
Not recorded MN MANGANESE (II) ION × 2 CA CALCIUM ION × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.30 Å
1LGB INTERACTION OF A LEGUME LECTIN WITH THE N2 FRAGMENT OF HUMAN LACTOTRANSFERRIN OR WITH THE ISOLATED BIANTENNARY GLYCOPEPTIDE: ROLE OF THE FUCOSE MOIETY Deposited 1994-01-07 Assembly 2 Other combination Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain C 111–269(159 aa)
Not recorded MN MANGANESE (II) ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 3.30 Å
1N76 CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION Deposited 2002-11-12 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–711(690 aa)
Not recorded NA SODIUM ION × 1 FE FE (III) ION × 2 CO3 CARBONATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;pH 8;298 K;Tris-HCl, ethanol, pH 8.0, MICRODIALYSIS, temperature 298.0K
Resolution 3.40 Å R-free 0.266
1SQY Structure of human diferric lactoferrin at 2.5A resolution using crystals grown at pH 6.5 Deposited 2004-03-22 Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–710(691 aa)
Not recorded FE FE (III) ION × 2 CO3 CARBONATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS;pH 6.5;277 K;Ethanol, Tris-HCL, pH 6.5, MICRODIALYSIS, temperature 277K
Resolution 2.50 Å R-free 0.215
1U62 NMR structure analysis of the lactoferrin-based peptide FQWQRNIRKVR in complex with lipopolysaccharide Deposited 2004-07-29 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 39–49(11 aa) Fragment:LF11
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 5.5;303 K;Ionic strength (raw mmCIF value) 20;Pressure 1
NMR sample composition 2mM lacfotefficin; 20mM sodium phosphate buffer (pH=5.5); 95% H2O, 5% D2O | 95% H2O/5% D2O
Resolution not provided
1VFD HUMAN LACTOFERRIN, N-TERMINAL LOBE MUTANT WITH ARG 121 REPLACED BY GLU (R121E) Deposited 1996-10-01 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–350(329 aa) Fragment:N-TERMINAL HALF-MOLECULE
Mutation:R121E FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.50 Å R-free 0.310
1VFE HUMAN LACTOFERRIN, N-TERMINAL LOBE MUTANT WITH ARG 121 REPLACED BY SER (R121S) Deposited 1996-10-01 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 22–353(332 aa) Fragment:N-TERMINAL HALF-MOLECULE
Mutation:R121S FE FE (III) ION × 1 CO3 CARBONATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8;50MM TRIS/HCL PH 8.0, 12% ISOPROPANOL
Resolution 2.30 Å R-free 0.270
1Z6V Human lactoferricin Deposited 2005-03-23 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–68(49 aa) Fragment:N-terminal peptide
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 3;298 K;Ionic strength (raw mmCIF value) no salt added;Pressure ambient
NMR sample composition 1mM lactoferricin | 4:4:1 chloroform-d:methanol-d3:D2O
Resolution not provided
1Z6W Human Lactoferricin Deposited 2005-03-23 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 20–68(49 aa) Fragment:N-terminal peptide
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 3.5;298 K;Ionic strength (raw mmCIF value) no salt added;Pressure ambient
NMR sample composition 1mM lactoferricin | 90% H20, 10% D2O
Resolution not provided
2BJJ Structure of recombinant human lactoferrin produced in the milk of transgenic cows Deposited 2005-02-03 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain X 20–711(692 aa)
Not recorded FE FE (III) ION × 2 CO3 CARBONATE ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray crystallization conditions pH 8.5;5 MM SODIUM PHOSPHATE PH 8.5, 10% (V/V) ETHANOL
Resolution 2.40 Å R-free 0.231
2DP4 Crystal structure of the complex formed between proteinase K and a human lactoferrin fragment at 2.9 A resolution Deposited 2006-05-05 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain I 528–535(8 aa)
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 4.6;298 K;0.2M Ammonium actate, 0.1M sodium acetate, 30% PEG 4000, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 2.90 Å R-free 0.235
7N88 The cryoEM structure of LbpB from N. gonorrhoeae in complex with lactoferrin Deposited 2021-06-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 20–710(691 aa)
Not recorded FE FE (III) ION × 2 BCT BICARBONATE ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.70 Å