Current Protein Identity：P0A9B2
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1DC3 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：APO
Chain B
1–330（330 aa）
Fragment：APO
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS-HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.50 Å R-free 0.241 |
| 1DC3 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 2 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：APO
Chain B
1–330（330 aa）
Fragment：APO
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS-HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.50 Å R-free 0.241 |
| 1DC4 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–330（330 aa）
Chain B
1–330（330 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) | G3P SN-GLYCEROL-3-PHOSPHATE × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.50 Å R-free 0.258 |
| 1DC4 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 2 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–330（330 aa）
Chain B
1–330（330 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) | G3P SN-GLYCEROL-3-PHOSPHATE × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.50 Å R-free 0.258 |
| 1DC5 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：APO
Chain B
1–330（330 aa）
Fragment：APO
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.00 Å R-free 0.281 |
| 1DC5 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES Deposited 1999-11-04 | Assembly 2 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：APO
Chain B
1–330（330 aa）
Fragment：APO
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, MAGNESIUM CHLORIDE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.00 Å R-free 0.281 |
| 1DC6 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES. Deposited 1999-11-04 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：HOLO
Chain B
1–330（330 aa）
Fragment：HOLO
|
Not recorded | NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, magnesium chloride, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.00 Å R-free 0.291 |
| 1DC6 STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES. Deposited 1999-11-04 | Assembly 2 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–330（330 aa）
Fragment：HOLO
Chain B
1–330（330 aa）
Fragment：HOLO
|
Not recorded | NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8.5；291 K；PEG 4000, magnesium chloride, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 2.00 Å R-free 0.291 |
| 1GAD COMPARISON OF THE STRUCTURES OF WILD TYPE AND A N313T MUTANT OF ESCHERICHIA COLI GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASES: IMPLICATION FOR NAD BINDING AND COOPERATIVITY Deposited 1995-10-24 | Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain O
1–330（330 aa）
Chain P
1–330（330 aa）
|
Not recorded | NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 4 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 1.80 Å |
| 1GAE COMPARISON OF THE STRUCTURES OF WILD TYPE AND A N313T MUTANT OF ESCHERICHIA COLI GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASES: IMPLICATION FOR NAD BINDING AND COOPERATIVITY Deposited 1995-10-24 | Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain O
1–330（330 aa）
Chain P
1–330（330 aa）
|
Mutation：N313T Mutation：N313T | NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 4 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 2.17 Å |
| 1S7C Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli Deposited 2004-01-29 | Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–330（330 aa）
|
Not recorded | SO4 SULFATE ION × 20 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 6；295 K；2.4M ammonium sulfate, 0.1M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.04 Å R-free 0.220 |
| 2VYN Structure of E.Coli GAPDH Rat Sperm GAPDH heterotetramer Deposited 2008-07-25 | Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–331（331 aa）
Chain B
1–331（331 aa）
Chain C
1–331（331 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) | FMT FORMIC ACID × 14 NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 7.5；0.2M NA FORMATE, 20% PEG 3350, 0.1M HEPES PH 7.5
|
Resolution 2.20 Å R-free 0.224 |
| 2VYV Structure of E.Coli GAPDH Rat Sperm GAPDH heterotetramer Deposited 2008-07-29 | Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–331（331 aa）
Chain B
1–331（331 aa）
Chain C
1–331（331 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) | FMT FORMIC ACID × 14 NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 4 1GP SN-GLYCEROL-1-PHOSPHATE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 7.5；0.2M NA FORMATE, 20% PEG 3350, 0.1M HEPES PH 7.5
|
Resolution 2.38 Å R-free 0.251 |
| 5O0V crystal structure of E. coli GAP-DH by fortuitous crystallization as an impurity from a solution of human liver FBPase Deposited 2017-05-17 | Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
2–331（330 aa）
|
Not recorded | GOL GLYCEROL × 8 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；298 K；unknown
|
Resolution 2.40 Å R-free 0.189 |
| 5ZA0 A cryo-protectant induces the conformational change of glyceraldehyde-3-phosphate dehydrogenase Deposited 2018-02-06 | Assembly 1 Other combination Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
1–331（331 aa）
|
Not recorded | SO4 SULFATE ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 5.8；277.15 K；Ammonium sulfate, MES
|
Resolution 2.00 Å R-free 0.205 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 10 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain J
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 11 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain K
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 12 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain L
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 13 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain M
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 14 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain N
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 15 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain O
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 16 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain P
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain C
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain D
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 5 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain E
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 6 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain F
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 7 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain G
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 8 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain H
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO4 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A Deposited 2018-10-29 | Assembly 9 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain I
3–331（329 aa）
|
Mutation：D78G | AG SILVER ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 3.10 Å R-free 0.240 |
| 6IO6 Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A at non-catalytic site Deposited 2018-10-29 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
3–331（329 aa）
|
Mutation：D79G | AG SILVER ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.1M Malic acid, PEG3350 20%
|
Resolution 2.64 Å R-free 0.243 |
| 6IOJ Glyceraldehyde-3-phosphate dehydrogenase A (apo-form) Deposited 2018-10-30 | Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain A
3–331（329 aa）
|
Mutation：D79G | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；0.15M Malic acid, PEG3350 25%
|
Resolution 2.29 Å R-free 0.221 |