Current Protein Identity：P17574
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 180-MERIC（180） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 60 U5P URIDINE-5'-MONOPHOSPHATE × 60 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 2 Protein–RNA Monomer；Protein × 1 PDB declaration: trimeric（3） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 1 U5P URIDINE-5'-MONOPHOSPHATE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 3 Protein–RNA Homooligomer；Protein × 5 PDB declaration: pentadecameric（15） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 5 U5P URIDINE-5'-MONOPHOSPHATE × 5 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 4 Protein–RNA Homooligomer；Protein × 6 PDB declaration: octadecameric（18） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 6 U5P URIDINE-5'-MONOPHOSPHATE × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 5 Protein–RNA Monomer；Protein × 1 PDB declaration: trimeric（3） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 1 U5P URIDINE-5'-MONOPHOSPHATE × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 1A34 SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX Deposited 1998-01-28 | Assembly 6 Protein–RNA Homooligomer；Protein × 15 PDB declaration: 45-meric（45） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | SO4 SULFATE ION × 15 U5P URIDINE-5'-MONOPHOSPHATE × 15 | X-RAY DIFFRACTION |
X-ray crystallization conditions
liquid diffusion in microgravity；pH 6.5；PROTEIN WAS FOUR TIMES RECRYSTALLIZED FROM BULK SOLUTION BY ADDITION AF AMMONIUM SULFATE TO 15% SATURATION. SPACE CRYSTALS WERE GROWN BY LIQUID-LIQUID DIFFUSION IN A MICROGRAVITY ENVIRONMENT OVER 12 DAYS ABOARD IML-I MISSION OF THE US SPACE SHUTTLE., pH 6.50, liquid diffusion in microgravity
|
Resolution 1.81 Å R-free 0.184 |
| 4NIA Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints Deposited 2013-11-05 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 240-meric（240） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain H
1–159（159 aa）
Chain I
1–159（159 aa）
Chain J
1–159（159 aa）
Chain K
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | MG MAGNESIUM ION × 12 PO4 PHOSPHATE ION × 12 SO4 SULFATE ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
LIQUID DIFFUSION；pH 6.5；296 K；9 crystals were grown in microgravity aboard IML-I mission of the U.S. Space Shuttle over 12 days using 20% ammonium sulfate as precipitant, pH 6.50, LIQUID DIFFUSION, temperature 296K
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；12 crystals grown from 8% ammonium sulfate on earth with a reservoir of 14-16% ammonium sulfate, pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.82 Å R-free 0.156 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 240-meric（240） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 60 SO4 SULFATE ION × 120 MG MAGNESIUM ION × 60 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 2 Protein–RNA Monomer；Protein × 1 PDB declaration: tetrameric（4） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 1 SO4 SULFATE ION × 2 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 3 Protein–RNA Homooligomer；Protein × 5 PDB declaration: eicosameric（20） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 5 SO4 SULFATE ION × 10 MG MAGNESIUM ION × 5 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 4 Protein–RNA Homooligomer；Protein × 6 PDB declaration: 24-meric（24） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 6 SO4 SULFATE ION × 12 MG MAGNESIUM ION × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 5 Protein–RNA Monomer；Protein × 1 PDB declaration: tetrameric（4） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 1 SO4 SULFATE ION × 2 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ8 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints Deposited 2014-02-07 | Assembly 6 Protein–RNA Homooligomer；Protein × 15 PDB declaration: 60-meric（60） Consistent with all polymers |
Chain A
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 15 SO4 SULFATE ION × 30 MG MAGNESIUM ION × 15 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.279 |
| 4OQ9 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints Deposited 2014-02-07 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 240-meric（240） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain H
1–159（159 aa）
Chain I
1–159（159 aa）
Chain J
1–159（159 aa）
Chain K
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 12 SO4 SULFATE ION × 72 NA SODIUM ION × 68 MG MAGNESIUM ION × 12 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.250 |
| 4OQ9 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints Deposited 2014-02-07 | Assembly 2 Protein–RNA Homooligomer；Protein × 15 PDB declaration: 60-meric（60） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain H
1–159（159 aa）
Chain I
1–159（159 aa）
Chain J
1–159（159 aa）
Chain K
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 3 SO4 SULFATE ION × 18 NA SODIUM ION × 17 MG MAGNESIUM ION × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.250 |
| 4OQ9 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints Deposited 2014-02-07 | Assembly 3 Protein–RNA Homooligomer；Protein × 15 PDB declaration: 60-meric（60） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain H
1–159（159 aa）
Chain I
1–159（159 aa）
Chain J
1–159（159 aa）
Chain K
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 3 SO4 SULFATE ION × 18 NA SODIUM ION × 17 MG MAGNESIUM ION × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.250 |
| 4OQ9 Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints Deposited 2014-02-07 | Assembly 4 Protein–RNA Homooligomer；Protein × 15 PDB declaration: 60-meric（60） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain H
1–159（159 aa）
Chain I
1–159（159 aa）
Chain J
1–159（159 aa）
Chain K
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 3 SO4 SULFATE ION × 18 NA SODIUM ION × 17 MG MAGNESIUM ION × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；296 K；crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K
|
Resolution 1.45 Å R-free 0.250 |
| 5BKL Crystallographic structure of the cubic crystal form of STMV (77.9 degree rotation) grown from NaCl Deposited 2021-03-20 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 117-meric（117） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | CL CHLORIDE ION × 120 MG MAGNESIUM ION × 39 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. The drops were composed of equal amounts of a 5 mg/ml stock virus solution buffered at pH6.5 with 0.1 M phosphate, and the reservoir solution which was 8% w/v NaCl buffered with 0.1 M phosphate at pH 6.0. Crystallization was carried out at 4 degrees C.
|
Resolution 2.94 Å R-free 0.256 |
| 5BKN Crystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chloride Deposited 2021-03-20 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 117-meric（117） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | CL CHLORIDE ION × 78 MG MAGNESIUM ION × 42 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using .6 ml reservoirs. The drops were composed of equal volumes of a 5 mg/ml virus stock solution of 0.1 M phosphate at pH 6.5, and the reservoir solution, which was 8% NaCl w/v in 0.1 M phosphate at pH 6.0. Crystallization was at 4 degrees C.
|
Resolution 3.00 Å R-free 0.255 |
| 5BKQ Crystallographic structure of a cubic form of STMV grown from nitrate Deposited 2021-03-21 | Assembly 1 Protein homooligomer Homooligomer；Protein × 60 PDB declaration: 60-meric（60） Consistent with protein count |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | NO3 NITRATE ION × 306 MG MAGNESIUM ION × 27 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. Drops were equal amounts of a 5 mg/ml virus stock solution buffered with 0.1 M phosphate at pH 6.5, and the reservoir solution which was 20% w/v sodium nitrate in 0.1 M phosphate at pH 6.0. Crystallization was carried out at 4 degrees C.
|
Resolution 3.19 Å R-free 0.273 |
| 7M2T Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic Virus Deposited 2021-03-17 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 218-meric（218） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain BB
1–159（159 aa）
Chain C
1–159（159 aa）
Chain CC
1–159（159 aa）
Chain D
1–159（159 aa）
Chain DD
1–159（159 aa）
Chain E
1–159（159 aa）
Chain EE
1–159（159 aa）
Chain F
1–159（159 aa）
Chain FF
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain LL
1–159（159 aa）
Chain M
1–159（159 aa）
Chain MM
1–159（159 aa）
Chain N
1–159（159 aa）
Chain NN
1–159（159 aa）
Chain O
1–159（159 aa）
Chain OO
1–159（159 aa）
Chain PP
1–159（159 aa）
|
Not recorded | MG MAGNESIUM ION × 12 PO4 PHOSPHATE ION × 12 SO4 SULFATE ION × 10 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；279 K；Crystals grown by vapor diffusion as sitting drops. Drops were equal volumes of a 6 mg/ml STMV stock solution buffered at pH 6.5 with 0.1 M phosphate. The reservoirs were 16% saturated ammonium sulfate in 0.1 M phosphate at pH 6.5. Drops were 6 to 8 ul with 0.60 ml reservoirs. Crystals were grown at 4 degrees C over a weeks time.
|
Resolution 2.71 Å R-free 0.177 |
| 7M2V Crystallographic Structure of the Rhombohedral Crystal Form of STMV Grown from Chloride Deposited 2021-03-17 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 120-meric（120） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain FX
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain NN
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | CL CHLORIDE ION × 39 MG MAGNESIUM ION × 24 PO4 PHOSPHATE ION × 12 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals grown by sitting drop vapor diffusion in Cryschem plates with 0.6 ml reservoirs and 6 to 8 ul drops. Drops were equal amounts of a 5 mg/ml virus stock solution buffered at pH 6.5 with 0.1 M phosphate, and the reservoir solution. The reservoir solution was 4% w/v NaCl in 0.1 M phosphate at pH 6.0. Crystallization was at 4 degrees C.
|
Resolution 1.80 Å R-free 0.217 |
| 7M3R Crystallographic Structure of the Rhombohedral Crystal Form of STMV Grown from Bromide Deposited 2021-03-18 | Assembly 1 Protein homooligomer Homooligomer；Protein × 60 PDB declaration: 60-meric（60） Consistent with protein count |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | BR BROMIDE ION × 573 MG MAGNESIUM ION × 24 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates with 0.6 ml reservoirs and 6 to 8 ul drops. The drops were equal amounts of a 5 mg/ml virus stock solution buffered at pH 6.5 with 0.1 M phosphate. The reservoirs were 5% w/v NaBr in 0.1 M phosphate at pH 6.0. Crystallization was at 4 degrees C and the time of development was about 10 days.
|
Resolution 2.10 Å R-free 0.208 |
| 7M3T Crystallographic structure of a cubic crystal of STMV (80.7 degree rotation about 111) grown from chloride Deposited 2021-03-19 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 117-meric（117） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 21 CL CHLORIDE ION × 42 MG MAGNESIUM ION × 18 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. The drops were equal volumes of 5 mg/ml STMV in 0.1 M phosphate at pH 6.5 and the reservoir solution, which was 8% w/v NaCl in 0.1 M phosphate at pH 6.0. Crystallization was carried out at 4 degrees C.
|
Resolution 3.20 Å R-free 0.254 |
| 7M50 Crystallographic structure of a cubic crystal form of STMV grown from ammonium sulfate Deposited 2021-03-22 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 117-meric（117） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 15 MG MAGNESIUM ION × 15 CL CHLORIDE ION × 3 SO4 SULFATE ION × 18 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. Drops were 6 to 8 ul and were composed of equal volumes of a 5 mg/ml virus stock solution containing 0.1 M phosphate at pH 6.5, and the reservoir solution. The reservoir solution was 18% ammonium sulfate in 0.1 M phosphate at pH 6.0. Crystallization was carried out at 4 degrees C.
|
Resolution 2.31 Å R-free 0.271 |
| 7M54 Crystallographic structure of a cubic crystal form of STMV grown from bromide Deposited 2021-03-22 | Assembly 1 Protein homooligomer Homooligomer；Protein × 60 PDB declaration: 60-meric（60） Consistent with protein count |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain C
1–159（159 aa）
Chain D
1–159（159 aa）
Chain E
1–159（159 aa）
Chain F
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain M
1–159（159 aa）
Chain N
1–159（159 aa）
Chain O
1–159（159 aa）
|
Not recorded | CA CALCIUM ION × 18 BR BROMIDE ION × 546 MG MAGNESIUM ION × 27 CL CHLORIDE ION × 9 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；279 K；crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. Drops were 6 to 8 ul and composed of equal volumes of a 5 mg/ml virus stock solution buffered at pH 6.5 with 0.1M phosphate, and the reservoir solution. The reservoir solution was 18% w/v NaBr buffered with 0.1 M phosphate at pH 6.0. Crystallization was carried out at 4 degrees C.
|
Resolution 3.80 Å R-free 0.285 |
| 7M57 Crystallographic structure of a primitive orthorhombic crystal form of STMV Deposited 2021-03-22 | Assembly 1 Protein–RNA Homooligomer；Protein × 60 PDB declaration: 218-meric（218） Consistent with all polymers |
Chain A
1–159（159 aa）
Chain B
1–159（159 aa）
Chain BB
1–159（159 aa）
Chain C
1–159（159 aa）
Chain CC
1–159（159 aa）
Chain D
1–159（159 aa）
Chain DD
1–159（159 aa）
Chain E
1–159（159 aa）
Chain EE
1–159（159 aa）
Chain F
1–159（159 aa）
Chain FF
1–159（159 aa）
Chain G
1–159（159 aa）
Chain GG
1–159（159 aa）
Chain H
1–159（159 aa）
Chain HH
1–159（159 aa）
Chain I
1–159（159 aa）
Chain II
1–159（159 aa）
Chain J
1–159（159 aa）
Chain JJ
1–159（159 aa）
Chain K
1–159（159 aa）
Chain KK
1–159（159 aa）
Chain L
1–159（159 aa）
Chain LL
1–159（159 aa）
Chain M
1–159（159 aa）
Chain MM
1–159（159 aa）
Chain N
1–159（159 aa）
Chain NN
1–159（159 aa）
Chain O
1–159（159 aa）
Chain OO
1–159（159 aa）
Chain PP
1–159（159 aa）
|
Not recorded | PO4 PHOSPHATE ION × 12 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；Crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs. The drops were 6 to 8 ul and composed of equal volumes of a 5 mg/ml virus stock solution buffered with 0.1 M phosphate at pH 6.5, and the reservoir. The reservoirs were 16% ammonium sulfate buffered at pH 6.0 with 0.1 M phosphate. Crystallization was a room temperature.
|
Resolution 4.00 Å |