当前蛋白身份:P43034
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 7MT1 Crystal structure of Human Platelet-activating factor acetylhydrolase IB subunit beta (PAFAH1B1) 提交 2021-05-12 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
86–410(325 aa)
|
未记录 | GOL GLYCEROL × 1 UNX UNKNOWN LIGAND × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;18% PEG8K, 0.1M Tris pH 8.5
|
分辨率 1.30 Å R-free 0.197 |
| 8DYU Structure of human cytoplasmic dynein-1 bound to two Lis1 proteins 提交 2022-08-05 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
2–410(409 aa)
链 C
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.00 Å |
| 8DYV Structure of human cytoplasmic dynein-1 bound to one Lis1 提交 2022-08-05 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.97 Å |
| 8FDT Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi 提交 2022-12-04 | Assembly 1 信息不足 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
2–410(409 aa)
链 C
2–410(409 aa)
|
未记录 | ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ADP ADENOSINE-5'-DIPHOSPHATE × 3 VO4 VANADATE ION × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4;50 mM Tris pH 7.4, 150 mM potassium acetate, 2 mM magnesium acetate, 1 mM EGTA, 1 mM DTT, and 0.1 mM Mg-ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.20 Å |
| 8FDU Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1) 提交 2022-12-04 | Assembly 1 信息不足 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
2–410(409 aa)
链 C
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 2 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4;50 mM Tris pH 7.4, 150 mM potassium acetate, 2 mM magnesium acetate, 1 mM EGTA, 1 mM DTT, and 0.1 mM Mg-ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.30 Å |
| 8PQW Cytoplasmic dynein-1 motor domain bound to dynactin-p150glued and LIS1 提交 2023-07-12 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致 |
链 B
1–410(410 aa)
链 C
1–410(410 aa)
链 D
1–410(410 aa)
链 E
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.20 Å |
| 8PQY Cytoplasmic dynein-1 motor domain bound to LIS1 提交 2023-07-12 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
1–410(410 aa)
链 C
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.80 Å |
| 8PQZ Cytoplasmic dynein-1 A1/A2 motor domains bound to LIS1 提交 2023-07-12 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 12 PDB 声明:12-meric(12) 与蛋白数一致 |
链 B
1–410(410 aa)
链 C
1–410(410 aa)
链 D
1–410(410 aa)
链 E
1–410(410 aa)
链 K
1–410(410 aa)
链 L
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 4 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 5.50 Å |
| 8PTK Composite structure of Dynein-Dynactin-JIP3-LIS1 提交 2023-07-14 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 53 PDB 声明:53-meric(53) 与蛋白数一致 |
链 1
1–410(410 aa)
链 2
1–410(410 aa)
链 3
1–410(410 aa)
链 4
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 16 ATP ADENOSINE-5'-TRIPHOSPHATE × 6 ZN ZINC ION × 3 MG MAGNESIUM ION × 6 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 10.00 Å |
| 9DZY Cryo-EM structure of Pre-Chi dynein bound to Lis1 提交 2024-10-17 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
2–410(409 aa)
链 E
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 3.10 Å |
| 9E0T Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-19 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 B
2–410(409 aa)
链 C
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 3.10 Å |
| 9E0W Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-20 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 C
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 2 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 3.20 Å |
| 9E0Z Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Nde1-Lis1 condition 提交 2024-10-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
1–410(410 aa)
链 D
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.86 Å |
| 9E11 Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Lis1 condition 提交 2024-10-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
1–410(410 aa)
链 D
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 2.86 Å |
| 9E13 Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Lis1 condition 提交 2024-10-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致 |
链 O
1–410(410 aa)
链 P
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.50 Å |
| 9E14 Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Nde1-Lis1 condition 提交 2024-10-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致 |
链 O
1–410(410 aa)
链 P
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 5.00 Å |
| 9E22 Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-21 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 E
2–410(409 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE-PROPANE
|
分辨率 3.30 Å |
| 9YNC Motor domains of phi-like human dynein-1 bound to dynactin-p150glued and LIS1 提交 2025-10-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 10 PDB 声明:decameric(10) 与蛋白数一致 |
链 C
1–410(410 aa)
链 D
1–410(410 aa)
链 E
1–410(410 aa)
链 F
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.93 Å |
| 9YND Motor domain of human dynein-1 in pre-power stroke bound to dynactin-p150glued-CC1B and LIS1 提交 2025-10-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致 |
链 B
1–410(410 aa)
链 C
1–410(410 aa)
链 D
1–410(410 aa)
链 E
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 2 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 4.26 Å |
| 9YNE Motor domain of human dynein-1 in pre-power stroke bound to dynactin-p150glued-CC1B-ICD and LIS1 提交 2025-10-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 12 PDB 声明:dodecameric(12) 与蛋白数一致 |
链 B
1–410(410 aa)
链 C
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.46 Å |
| 9YNH Full-length human cytoplasmic dynein-1 in phi-like state bound to dynactin-p150glued and LIS1 提交 2025-10-10 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 18 PDB 声明:octadecameric(18) 与蛋白数一致 |
链 O
1–410(410 aa)
链 P
1–410(410 aa)
|
未记录 | ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.2
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 5.50 Å |