当前蛋白身份:P43034 重新检索
本组结构的主要差异维度
构建体不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
7MT1 Crystal structure of Human Platelet-activating factor acetylhydrolase IB subunit beta (PAFAH1B1) 提交 2021-05-12 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 86–410(325 aa)
未记录 GOL GLYCEROL × 1 UNX UNKNOWN LIGAND × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;18% PEG8K, 0.1M Tris pH 8.5
分辨率 1.30 Å R-free 0.197
8DYU Structure of human cytoplasmic dynein-1 bound to two Lis1 proteins 提交 2022-08-05 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–410(409 aa)
链 C 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.00 Å
8DYV Structure of human cytoplasmic dynein-1 bound to one Lis1 提交 2022-08-05 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.97 Å
8FDT Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi 提交 2022-12-04 Assembly 1 信息不足 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–410(409 aa)
链 C 2–410(409 aa)
未记录 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ADP ADENOSINE-5'-DIPHOSPHATE × 3 VO4 VANADATE ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4;50 mM Tris pH 7.4, 150 mM potassium acetate, 2 mM magnesium acetate, 1 mM EGTA, 1 mM DTT, and 0.1 mM Mg-ATP
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.20 Å
8FDU Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1) 提交 2022-12-04 Assembly 1 信息不足 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–410(409 aa)
链 C 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4;50 mM Tris pH 7.4, 150 mM potassium acetate, 2 mM magnesium acetate, 1 mM EGTA, 1 mM DTT, and 0.1 mM Mg-ATP
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.30 Å
8PQW Cytoplasmic dynein-1 motor domain bound to dynactin-p150glued and LIS1 提交 2023-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 B 1–410(410 aa)
链 C 1–410(410 aa)
链 D 1–410(410 aa)
链 E 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.20 Å
8PQY Cytoplasmic dynein-1 motor domain bound to LIS1 提交 2023-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 1–410(410 aa)
链 C 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.80 Å
8PQZ Cytoplasmic dynein-1 A1/A2 motor domains bound to LIS1 提交 2023-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 12 PDB 声明:12-meric(12) 与蛋白数一致
链 B 1–410(410 aa)
链 C 1–410(410 aa)
链 D 1–410(410 aa)
链 E 1–410(410 aa)
链 K 1–410(410 aa)
链 L 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 MG MAGNESIUM ION × 4 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 5.50 Å
8PTK Composite structure of Dynein-Dynactin-JIP3-LIS1 提交 2023-07-14 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 53 PDB 声明:53-meric(53) 与蛋白数一致
链 1 1–410(410 aa)
链 2 1–410(410 aa)
链 3 1–410(410 aa)
链 4 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 16 ATP ADENOSINE-5'-TRIPHOSPHATE × 6 ZN ZINC ION × 3 MG MAGNESIUM ION × 6 ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 10.00 Å
9DZY Cryo-EM structure of Pre-Chi dynein bound to Lis1 提交 2024-10-17 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 C 2–410(409 aa)
链 E 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.10 Å
9E0T Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-19 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 B 2–410(409 aa)
链 C 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.10 Å
9E0W Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.20 Å
9E0Z Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Nde1-Lis1 condition 提交 2024-10-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 C 1–410(410 aa)
链 D 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 2.86 Å
9E11 Dimeric motor domains from phi-like dynein-1 bound to a Lis1 dimer under Lis1 condition 提交 2024-10-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 C 1–410(410 aa)
链 D 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 2.86 Å
9E13 Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Lis1 condition 提交 2024-10-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致
链 O 1–410(410 aa)
链 P 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.50 Å
9E14 Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Nde1-Lis1 condition 提交 2024-10-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致
链 O 1–410(410 aa)
链 P 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2;25 mM HEPES pH 7.2, 150 mM KCl, 1 mM MgCl2, 5 mM DTT, 3 mM ATP
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 5.00 Å
9E22 Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP 提交 2024-10-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 E 2–410(409 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.4
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.30 Å
9YNC Motor domains of phi-like human dynein-1 bound to dynactin-p150glued and LIS1 提交 2025-10-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 10 PDB 声明:decameric(10) 与蛋白数一致
链 C 1–410(410 aa)
链 D 1–410(410 aa)
链 E 1–410(410 aa)
链 F 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.93 Å
9YND Motor domain of human dynein-1 in pre-power stroke bound to dynactin-p150glued-CC1B and LIS1 提交 2025-10-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 B 1–410(410 aa)
链 C 1–410(410 aa)
链 D 1–410(410 aa)
链 E 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 MG MAGNESIUM ION × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 4.26 Å
9YNE Motor domain of human dynein-1 in pre-power stroke bound to dynactin-p150glued-CC1B-ICD and LIS1 提交 2025-10-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 12 PDB 声明:dodecameric(12) 与蛋白数一致
链 B 1–410(410 aa)
链 C 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 8.46 Å
9YNH Full-length human cytoplasmic dynein-1 in phi-like state bound to dynactin-p150glued and LIS1 提交 2025-10-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 18 PDB 声明:octadecameric(18) 与蛋白数一致
链 O 1–410(410 aa)
链 P 1–410(410 aa)
未记录 ADP ADENOSINE-5'-DIPHOSPHATE × 6 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 MG MAGNESIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.2
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 5.50 Å