8ptk

Composite structure of Dynein-Dynactin-JIP3-LIS1

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Platelet-activating factor acetylhydrolase IB subunit beta

Homo sapiens

UniProt P43034

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name LIS1_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 1; PDBConstruct 1–410; UniProt 1–410 Author chain 2; PDBConstruct 1–410; UniProt 1–410 Author chain 3; PDBConstruct 1–410; UniProt 1–410 Author chain 4; PDBConstruct 1–410; UniProt 1–410

ARP1 actin related protein 1 homolog A

OrganismNot specified

UniProt F2Z5G5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name F2Z5G5_PIG
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 1–376; UniProt 1–376 Author chain B; PDBConstruct 1–376; UniProt 1–376 Author chain C; PDBConstruct 1–376; UniProt 1–376 Author chain D; PDBConstruct 1–376; UniProt 1–376 Author chain E; PDBConstruct 1–376; UniProt 1–376 Author chain F; PDBConstruct 1–376; UniProt 1–376 Author chain G; PDBConstruct 1–376; UniProt 1–376 Author chain I; PDBConstruct 1–376; UniProt 1–376

Actin, cytoplasmic 1

OrganismNot specified

UniProt Q6QAQ1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ACTB_PIG
Isoform —
PDB entities 3
Chains and sequence ranges Author chain H; PDBConstruct 1–375; UniProt 1–375

Arp11

OrganismNot specified

UniProt I3LHK5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name I3LHK5_PIG
Isoform —
PDB entities 4
Chains and sequence ranges Author chain J; PDBConstruct 1–417; UniProt 1–417

Capping protein (Actin filament) muscle Z-line, alpha 1

OrganismNot specified

UniProt A0PFK5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0PFK5_PIG
Isoform —
PDB entities 5
Chains and sequence ranges Author chain K; PDBConstruct 1–286; UniProt 1–286

F-actin-capping protein subunit beta

OrganismNot specified

UniProt A0PFK7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CAPZB_PIG
Isoform —
PDB entities 6
Chains and sequence ranges Author chain L; PDBConstruct 1–272; UniProt 1–272

Dynactin subunit 2

OrganismNot specified

UniProt A0A5G2QD80

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A5G2QD80_PIG
Isoform —
PDB entities 7
Chains and sequence ranges Author chain M; PDBConstruct 1–405; UniProt 1–405 Author chain N; PDBConstruct 1–405; UniProt 1–405 Author chain P; PDBConstruct 1–405; UniProt 1–405 Author chain Q; PDBConstruct 1–405; UniProt 1–405

Dynactin subunit 3

OrganismNot specified

UniProt F1SEC0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name F1SEC0_PIG
Isoform —
PDB entities 8
Chains and sequence ranges Author chain O; PDBConstruct 1–186; UniProt 1–186 Author chain R; PDBConstruct 1–186; UniProt 1–186

Dynactin subunit 1

OrganismNot specified

UniProt A0A287B8J2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DCTN1_PIG
Isoform —
PDB entities 9
Chains and sequence ranges Author chain S; PDBConstruct 1–1281; UniProt 1–1281 Author chain T; PDBConstruct 1–1281; UniProt 1–1281

Dynactin 6

OrganismNot specified

UniProt D0G6S1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name D0G6S1_PIG
Isoform —
PDB entities 10
Chains and sequence ranges Author chain U; PDBConstruct 1–190; UniProt 1–190

Dynactin subunit 5

OrganismNot specified

UniProt A0A286ZK88

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A286ZK88_PIG
Isoform —
PDB entities 11
Chains and sequence ranges Author chain W; PDBConstruct 1–182; UniProt 1–182

C-Jun-amino-terminal kinase-interacting protein 3

Homo sapiens

UniProt Q9UPT6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name JIP3_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain X; PDBConstruct 8–567; UniProt 1–560 Author chain x; PDBConstruct 8–567; UniProt 1–560

Dynactin subunit 4

OrganismNot specified

UniProt A0A4X1TB62

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name A0A4X1TB62_PIG
Isoform —
PDB entities 13
Chains and sequence ranges Author chain Y; PDBConstruct 1–467; UniProt 1–467

Dynein light chain 1, cytoplasmic

Homo sapiens

UniProt P63167

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DYL1_HUMAN
Isoform —
PDB entities 14
Chains and sequence ranges Author chain a; PDBConstruct 1–89; UniProt 1–89 Author chain b; PDBConstruct 1–89; UniProt 1–89 Author chain d; PDBConstruct 1–89; UniProt 1–89 Author chain i; PDBConstruct 1–89; UniProt 1–89

Cytoplasmic dynein 1 heavy chain 1

Homo sapiens

UniProt Q14204

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DYHC1_HUMAN
Isoform —
PDB entities 15
Chains and sequence ranges Author chain e; PDBConstruct 1–4646; UniProt 1–4646 Author chain f; PDBConstruct 1–4646; UniProt 1–4646 Author chain m; PDBConstruct 1–4646; UniProt 1–4646 Author chain n; PDBConstruct 1–4646; UniProt 1–4646

Cytoplasmic dynein 1 intermediate chain 2

Homo sapiens

UniProt Q13409

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DC1I2_HUMAN
Isoform Q13409-3
PDB entities 16
Chains and sequence ranges Author chain g; PDBConstruct 1–612; UniProt 1–612 Author chain h; PDBConstruct 1–612; UniProt 1–612 Author chain o; PDBConstruct 1–612; UniProt 1–612 Author chain p; PDBConstruct 1–612; UniProt 1–612

Cytoplasmic dynein 1 light intermediate chain 2

Homo sapiens

UniProt O43237

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Dynein light chain Tctex-type 1 × 4 (P63172) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DC1L2_HUMAN
Isoform —
PDB entities 17
Chains and sequence ranges Author chain j; PDBConstruct 1–492; UniProt 1–492 Author chain q; PDBConstruct 1–492; UniProt 1–492 Author chain r; PDBConstruct 1–492; UniProt 1–492 Author chain u; PDBConstruct 1–492; UniProt 1–492

Dynein light chain Tctex-type 1

Homo sapiens

UniProt P63172

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain roadblock-type 1 × 4 (Q9NP97) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DYLT1_HUMAN
Isoform —
PDB entities 18
Chains and sequence ranges Author chain k; PDBConstruct 1–113; UniProt 1–113 Author chain l; PDBConstruct 1–113; UniProt 1–113 Author chain v; PDBConstruct 1–113; UniProt 1–113 Author chain y; PDBConstruct 1–113; UniProt 1–113

Dynein light chain roadblock-type 1

Homo sapiens

UniProt Q9NP97

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 53 Platelet-activating factor acetylhydrolase IB subunit beta × 4 (P43034) ARP1 actin related protein 1 homolog A × 8 (F2Z5G5) Actin, cytoplasmic 1 × 1 (Q6QAQ1) Arp11 × 1 (I3LHK5) Capping protein (Actin filament) muscle Z-line, alpha 1 × 1 (A0PFK5) F-actin-capping protein subunit beta × 1 (A0PFK7) Dynactin subunit 2 × 4 (A0A5G2QD80) Dynactin subunit 3 × 2 (F1SEC0) Dynactin subunit 1 × 2 (A0A287B8J2) Dynactin 6 × 1 (D0G6S1) Dynactin subunit 5 × 1 (A0A286ZK88) C-Jun-amino-terminal kinase-interacting protein 3 × 2 (Q9UPT6) Dynactin subunit 4 × 1 (A0A4X1TB62) Dynein light chain 1, cytoplasmic × 4 (P63167) Cytoplasmic dynein 1 heavy chain 1 × 4 (Q14204) Cytoplasmic dynein 1 intermediate chain 2 × 4 (Q13409) Cytoplasmic dynein 1 light intermediate chain 2 × 4 (O43237) Dynein light chain Tctex-type 1 × 4 (P63172) ADENOSINE-5'-DIPHOSPHATE × 16 ADENOSINE-5'-TRIPHOSPHATE × 6 ZINC ION × 3 MAGNESIUM ION × 6 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DLRB1_HUMAN
Isoform —
PDB entities 19
Chains and sequence ranges Author chain s; PDBConstruct 1–96; UniProt 1–96 Author chain t; PDBConstruct 1–96; UniProt 1–96 Author chain w; PDBConstruct 1–96; UniProt 1–96 Author chain z; PDBConstruct 1–96; UniProt 1–96

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8ptk
Deposition date deposition_date2023-07-14
Structure title titleComposite structure of Dynein-Dynactin-JIP3-LIS1
Keywords keywordsDynein, AAA-Atpase, p150, LIS1, MOTOR PROTEIN, Dynactin, JIP3; MOTOR PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8ptk__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8ptk__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8ptk__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)202.20 Å
Total Rg202.10 Å
Atom count161538
Residues32470
Excluded volume2600600 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8ptk__assembly_1__model_1 53-meric (53) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (24)

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7. Citations (1)