6rlb

Structure of the dynein-2 complex; tail domain

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein

Homo sapiens

UniProt B0I1S0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 WD repeat-containing protein 60 × 1 (Q8WVS4) WD repeat-containing protein 34 × 1 (Q96EX3) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name B0I1S0_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 208–4513; UniProt 2–4307 Author chain B; PDBConstruct 208–4513; UniProt 2–4307

O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein

Homo sapiens

UniProt E5BBQ0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 WD repeat-containing protein 60 × 1 (Q8WVS4) WD repeat-containing protein 34 × 1 (Q96EX3) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name E5BBQ0_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 2–178; UniProt 5–181 Author chain B; PDBConstruct 2–178; UniProt 5–181

WD repeat-containing protein 60

Homo sapiens

UniProt Q8WVS4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein × 2 (B0I1S0,E5BBQ0) WD repeat-containing protein 34 × 1 (Q96EX3) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name WDR60_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–1066; UniProt 1–1066

WD repeat-containing protein 34

Homo sapiens

UniProt Q96EX3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein × 2 (B0I1S0,E5BBQ0) WD repeat-containing protein 60 × 1 (Q8WVS4) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name WDR34_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D; PDBConstruct 1–536; UniProt 1–536

Cytoplasmic dynein 2 light intermediate chain 1

Homo sapiens

UniProt Q8TCX1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein × 2 (B0I1S0,E5BBQ0) WD repeat-containing protein 60 × 1 (Q8WVS4) WD repeat-containing protein 34 × 1 (Q96EX3) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DC2L1_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain E; PDBConstruct 1–351; UniProt 1–351 Author chain F; PDBConstruct 1–351; UniProt 1–351

Dynein light chain roadblock-type 1

Homo sapiens

UniProt Q9NP97

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein × 2 (B0I1S0,E5BBQ0) WD repeat-containing protein 60 × 1 (Q8WVS4) WD repeat-containing protein 34 × 1 (Q96EX3) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain 1, cytoplasmic × 6 (P63167) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DLRB1_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain G; PDBConstruct 1–96; UniProt 1–96 Author chain H; PDBConstruct 1–96; UniProt 1–96

Dynein light chain 1, cytoplasmic

Homo sapiens

UniProt P63167

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Heteromer Protein 14 O6-alkylguanine-DNA alkyltransferase mutant,DYNC2H1 variant protein × 2 (B0I1S0,E5BBQ0) WD repeat-containing protein 60 × 1 (Q8WVS4) WD repeat-containing protein 34 × 1 (Q96EX3) Cytoplasmic dynein 2 light intermediate chain 1 × 2 (Q8TCX1) Dynein light chain roadblock-type 1 × 2 (Q9NP97) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DYL1_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain I; PDBConstruct 1–89; UniProt 1–89 Author chain J; PDBConstruct 1–89; UniProt 1–89 Author chain K; PDBConstruct 1–89; UniProt 1–89 Author chain L; PDBConstruct 1–89; UniProt 1–89 Author chain M; PDBConstruct 1–89; UniProt 1–89 Author chain N; PDBConstruct 1–89; UniProt 1–89

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6rlb
Deposition date deposition_date2019-05-01
Structure title titleStructure of the dynein-2 complex; tail domain
Keywords keywordsdynein, cilia, intraflagellar transport, complex, motor protein; MOTOR PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6rlb__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6rlb__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6rlb__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)67.52 Å
Rg (electron density)68.01 Å
Total Rg67.84 Å
Atom count20407
Residues4122
Excluded volume328720 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6rlb__assembly_1__model_1 tetradecameric (14) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (6)

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7. Citations (1)