Current Protein Identity:P49643
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 3L9Q Crystal structure of human polymerase alpha-primase p58 iron-sulfur cluster domain Deposited 2010-01-05 | Assembly 1 Protein homooligomer Homooligomer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain A
272–464(193 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-464)
Chain B
272–464(193 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-464)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 4 SO4 SULFATE ION × 10 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;294 K;0.1 M Tris pH 8.5, 15% PEG 3250, 0.2 M LiSO4, VAPOR DIFFUSION, SITTING DROP, temperature 294K
|
Resolution 1.70 Å R-free 0.169 |
| 3L9Q Crystal structure of human polymerase alpha-primase p58 iron-sulfur cluster domain Deposited 2010-01-05 | Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain A
272–464(193 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-464)
Chain B
272–464(193 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-464)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 2 SO4 SULFATE ION × 5 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;294 K;0.1 M Tris pH 8.5, 15% PEG 3250, 0.2 M LiSO4, VAPOR DIFFUSION, SITTING DROP, temperature 294K
|
Resolution 1.70 Å R-free 0.169 |
| 3Q36 Crystal structure of the 4Fe-4S cluster domain of human DNA primase large subunit Deposited 2010-12-21 | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain A
266–457(192 aa)
Fragment:4Fe-4S cluster domain (UNP residues 266-457)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;295 K;0.2 M magnesium acetate tetrahydrate, 0.05 M sodium cacodylate, 15% w/v PEG8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
|
Resolution 2.50 Å R-free 0.250 |
| 3Q36 Crystal structure of the 4Fe-4S cluster domain of human DNA primase large subunit Deposited 2010-12-21 | Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain B
266–457(192 aa)
Fragment:4Fe-4S cluster domain (UNP residues 266-457)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 FE FE (III) ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;295 K;0.2 M magnesium acetate tetrahydrate, 0.05 M sodium cacodylate, 15% w/v PEG8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
|
Resolution 2.50 Å R-free 0.250 |
| 4BPU Crystal structure of human primase in heterodimeric form, comprising PriS and truncated PriL lacking the C-terminal Fe-S domain. Deposited 2013-05-28 | Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain B
1–253(253 aa)
Fragment:RESIDUES 1-253
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4- BUTANEDIOL AND 1,3-PROPANEDIOL
|
Resolution 2.70 Å R-free 0.245 |
| 4BPU Crystal structure of human primase in heterodimeric form, comprising PriS and truncated PriL lacking the C-terminal Fe-S domain. Deposited 2013-05-28 | Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain D
1–253(253 aa)
Fragment:RESIDUES 1-253
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4- BUTANEDIOL AND 1,3-PROPANEDIOL
|
Resolution 2.70 Å R-free 0.245 |
| 4BPW Crystal structure of human primase bound to UTP Deposited 2013-05-28 | Assembly 3 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain B
1–253(253 aa)
Fragment:PRIL, RESIDUES 1-253
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4-BUTANEDIOL AND 1,3-PROPANEDIOL.
|
Resolution 3.00 Å R-free 0.253 |
| 4BPW Crystal structure of human primase bound to UTP Deposited 2013-05-28 | Assembly 4 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain D
1–253(253 aa)
Fragment:PRIL, RESIDUES 1-253
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4-BUTANEDIOL AND 1,3-PROPANEDIOL.
|
Resolution 3.00 Å R-free 0.253 |
| 4BPX Crystal structure of human primase in complex with the primase- binding motif of DNA polymerase alpha Deposited 2013-05-28 | Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain D
19–253(235 aa)
Fragment:PRIMASE-BINDING MOTIF RESIDUES 1445-1462, PRIL RESIDUES 19-253
|
Not recorded | ZN ZINC ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4- BUTANEDIOL AND 1,3-PROPANEDIOL.
|
Resolution 3.40 Å R-free 0.267 |
| 4BPX Crystal structure of human primase in complex with the primase- binding motif of DNA polymerase alpha Deposited 2013-05-28 | Assembly 3 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain B
19–253(235 aa)
Fragment:PRIMASE-BINDING MOTIF RESIDUES 1445-1462, PRIL RESIDUES 19-253
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
100MM TRIS-HCL/BICINE PH 8.5, 20% GLYCEROL, 10% PEG4000 AND 20MM EACH OF AN ALCOHOL MIX COMPRISING 1,6-HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4- BUTANEDIOL AND 1,3-PROPANEDIOL.
|
Resolution 3.40 Å R-free 0.267 |
| 4RR2 Crystal structure of human primase Deposited 2014-11-05 | Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain B
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;50 mM Tris-HCl pH 8.5, 7.5% v/v ethanol and 2 mM TCEP, VAPOR DIFFUSION, SITTING DROP, temperature 295K
|
Resolution 2.65 Å R-free 0.271 |
| 4RR2 Crystal structure of human primase Deposited 2014-11-05 | Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain D
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 1 SF4 IRON/SULFUR CLUSTER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;50 mM Tris-HCl pH 8.5, 7.5% v/v ethanol and 2 mM TCEP, VAPOR DIFFUSION, SITTING DROP, temperature 295K
|
Resolution 2.65 Å R-free 0.271 |
| 5DQO Crystal structure of Y347F mutant of human primase p58 iron-sulfur cluster domain Deposited 2015-09-15 | Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain A
272–464(193 aa)
Fragment:p58C domain (UNP residues 272-464)
Chain B
272–464(193 aa)
Fragment:p58C domain (UNP residues 272-464)
|
Mutation:Y347F Mutation:Y347F | SF4 IRON/SULFUR CLUSTER × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295 K;300 mM lithium sulfate, 100 mM Tris, pH 8.5, 20% PEG3350
|
Resolution 2.30 Å R-free 0.275 |
| 5DQO Crystal structure of Y347F mutant of human primase p58 iron-sulfur cluster domain Deposited 2015-09-15 | Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain C
272–464(193 aa)
Fragment:p58C domain (UNP residues 272-464)
Chain D
272–464(193 aa)
Fragment:p58C domain (UNP residues 272-464)
|
Mutation:Y347F Mutation:Y347F | SF4 IRON/SULFUR CLUSTER × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295 K;300 mM lithium sulfate, 100 mM Tris, pH 8.5, 20% PEG3350
|
Resolution 2.30 Å R-free 0.275 |
| 5EXR Crystal structure of human primosome Deposited 2015-11-24 | Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain B
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;0.2 M lithium sulphate, 50 mM TRIS HCl pH 8.5, 2 mM TCEP pH 7.5, 11.2% w/v PEG 4,000, 3% v/v ethanol, 0.5% v/v polypropylene glycol P400 and 0.2 mM EDTA
|
Resolution 3.60 Å R-free 0.326 |
| 5EXR Crystal structure of human primosome Deposited 2015-11-24 | Assembly 2 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain F
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;295 K;0.2 M lithium sulphate, 50 mM TRIS HCl pH 8.5, 2 mM TCEP pH 7.5, 11.2% w/v PEG 4,000, 3% v/v ethanol, 0.5% v/v polypropylene glycol P400 and 0.2 mM EDTA
|
Resolution 3.60 Å R-free 0.326 |
| 5F0Q Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer Deposited 2015-11-28 | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: trimeric(3) Consistent with all polymers |
Chain A
266–456(191 aa)
Fragment:UNP residues 266-456
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;0.18 M lithium sulfate, 50 mM sodium citrate, 2 mM TCEP, 0.1 M sodium malonate, 0.1 M Hepes-NaOH (pH 7.0), 19.7% PEG 8,000 and 0.02 M magnesium chloride
|
Resolution 2.21 Å R-free 0.258 |
| 5F0Q Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer Deposited 2015-11-28 | Assembly 2 Other combination Monomer;Protein × 1 PDB declaration: trimeric(3) Consistent with all polymers |
Chain B
266–456(191 aa)
Fragment:UNP residues 266-456
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;0.18 M lithium sulfate, 50 mM sodium citrate, 2 mM TCEP, 0.1 M sodium malonate, 0.1 M Hepes-NaOH (pH 7.0), 19.7% PEG 8,000 and 0.02 M magnesium chloride
|
Resolution 2.21 Å R-free 0.258 |
| 5F0S Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer and manganese ion Deposited 2015-11-28 | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: trimeric(3) Consistent with all polymers |
Chain A
266–456(191 aa)
Fragment:UNP residues 266-456
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 MN MANGANESE (II) ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;Reservoir solution containe 0.18 M lithium sulfate, 50 mM sodium citrate, 2 mM TCEP, 0.1 M sodium malonate, 0.1 M Hepes-NaOH (pH 7.0), 19.7% PEG 8,000 and 0.02 M magnesium chloride. To exchange Mg to Mn crystals were soaked for 5 min in a reservoir solution containing 2 mM manganese chloride instead of magnesium chloride.
|
Resolution 3.00 Å R-free 0.269 |
| 5F0S Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer and manganese ion Deposited 2015-11-28 | Assembly 2 Other combination Monomer;Protein × 1 PDB declaration: trimeric(3) Consistent with all polymers |
Chain B
266–456(191 aa)
Fragment:UNP residues 266-456
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 MN MANGANESE (II) ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;295 K;Reservoir solution containe 0.18 M lithium sulfate, 50 mM sodium citrate, 2 mM TCEP, 0.1 M sodium malonate, 0.1 M Hepes-NaOH (pH 7.0), 19.7% PEG 8,000 and 0.02 M magnesium chloride. To exchange Mg to Mn crystals were soaked for 5 min in a reservoir solution containing 2 mM manganese chloride instead of magnesium chloride.
|
Resolution 3.00 Å R-free 0.269 |
| 5I7M Crystal structure of Y345F mutant of human primase p58 iron-sulfur cluster domain Deposited 2016-02-17 | Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain A
272–457(186 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-457)
Chain B
272–457(186 aa)
Fragment:iron-sulfur cluster domain (UNP residues 272-457)
|
Mutation:Y345F Mutation:Y345F | SF4 IRON/SULFUR CLUSTER × 2 SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;75 mg/mL p58C Y345F in 20 mM MES, pH 6.5, 50 mM sodium chloride, reservoir solution: 100 mM Tris, pH 8.5, 150 mM lithium sulfate, 18% PEG3350
|
Resolution 1.93 Å R-free 0.250 |
| 6DHW Crystal structure of primase iron-sulfur domain (266-457) Deposited 2018-05-21 | Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain A
266–457(192 aa)
Chain B
266–457(192 aa)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 2 SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.5;289 K;100 mM TRIS-HCl pH 8.5, 400 mM LiSO4, 18% PEG3350
|
Resolution 2.01 Å R-free 0.211 |
| 6DHW Crystal structure of primase iron-sulfur domain (266-457) Deposited 2018-05-21 | Assembly 2 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain A
266–457(192 aa)
Chain B
266–457(192 aa)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 2 SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 8.5;289 K;100 mM TRIS-HCl pH 8.5, 400 mM LiSO4, 18% PEG3350
|
Resolution 2.01 Å R-free 0.211 |
| 7OPL CryoEM structure of DNA Polymerase alpha - primase bound to SARS CoV nsp1 Deposited 2021-06-01 | Assembly 1 Protein heterocomplex Heteromer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count |
Chain D
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.2
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.12 Å |
| 7U5C Cryo-EM structure of human CST bound to DNA polymerase alpha-primase in a recruitment state Deposited 2022-03-02 | Assembly 1 Protein–DNA Heteromer;Protein × 7 PDB declaration: octameric(8) Consistent with all polymers |
Chain B
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 4 SF4 IRON/SULFUR CLUSTER × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.60 Å |
| 8B9D Human replisome bound by Pol Alpha Deposited 2022-10-05 | Assembly 1 Protein–DNA Heteromer;Protein × 21 PDB declaration: 23-meric(23) Consistent with all polymers |
Chain P
1–509(509 aa)
|
Not recorded | ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 3 MG MAGNESIUM ION × 3 ZN ZINC ION × 4 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.6
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å |
| 8D0B Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback template Deposited 2022-05-26 | Assembly 1 Protein–DNA Heteromer;Protein × 7 PDB declaration: octameric(8) Consistent with all polymers |
Chain E
16–256(241 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5;CHAPSO is only added just before sample vitrification.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.43 Å |
| 8D0K Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback template - PRIM2C advanced PIC Deposited 2022-05-26 | Assembly 1 Protein–DNA Heteromer;Protein × 7 PDB declaration: octameric(8) Consistent with all polymers |
Chain E
2–509(508 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5;CHAPSO is only added just before sample vitrification.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.27 Å |
| 8D96 Human DNA polymerase alpha/primase elongation complex I bound to primer/template Deposited 2022-06-09 | Assembly 1 Protein–DNA Heteromer;Protein × 2 PDB declaration: tetrameric(4) Consistent with all polymers |
Chain B
1–509(509 aa)
|
Not recorded | SF4 IRON/SULFUR CLUSTER × 1 MG MAGNESIUM ION × 1 DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5;CHAPSO is made fresh at 80 mM before added to the sample at a final concentration of 4-8 mM immediately before vitrification.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.35 Å |
| 8D9D Human DNA polymerase-alpha/primase elongation complex II bound to primer/template Deposited 2022-06-09 | Assembly 1 Protein–DNA Heteromer;Protein × 4 PDB declaration: hexameric(6) Consistent with all polymers |
Chain B
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 MG MAGNESIUM ION × 2 DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5;CHAPSO is made fresh at 80 mM before added to the sample at a final concentration of 4-8 mM immediately before vitrification.
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.59 Å |
| 8QJ7 Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 1 Deposited 2023-09-12 | Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain D
1–509(509 aa)
|
Not recorded | ZN ZINC ION × 3 MN MANGANESE (II) ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 SF4 IRON/SULFUR CLUSTER × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.07 Å |
| 8VY3 Human DNA polymerase alpha/primase - AavLEA1 (1:40 molar ratio) Deposited 2024-02-06 | Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain B
22–455(434 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.98 Å |
| 9C8V Human DNA polymerase alpha/primase - CHAPSO (4 mM) Deposited 2024-06-13 | Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain B
22–455(434 aa)
|
Not recorded | ZN ZINC ION × 3 SF4 IRON/SULFUR CLUSTER × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.39 Å |