当前蛋白身份:Q08649 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1FY7 CRYSTAL STRUCTURE OF YEAST ESA1 HISTONE ACETYLTRANSFERASE DOMAIN COMPLEXED WITH COENZYME A 提交 2000-09-28 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:ACETYLTRANSFERASE DOMAIN
未记录 NA SODIUM ION × 1 COA COENZYME A × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;amonium phosphate, cacodylate,, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
分辨率 2.00 Å R-free 0.236
1FY7 CRYSTAL STRUCTURE OF YEAST ESA1 HISTONE ACETYLTRANSFERASE DOMAIN COMPLEXED WITH COENZYME A 提交 2000-09-28 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:ACETYLTRANSFERASE DOMAIN
未记录 NA SODIUM ION × 3 COA COENZYME A × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;amonium phosphate, cacodylate,, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
分辨率 2.00 Å R-free 0.236
1FY7 CRYSTAL STRUCTURE OF YEAST ESA1 HISTONE ACETYLTRANSFERASE DOMAIN COMPLEXED WITH COENZYME A 提交 2000-09-28 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 160–435(276 aa) 片段:ACETYLTRANSFERASE DOMAIN
未记录 NA SODIUM ION × 6 COA COENZYME A × 6 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;amonium phosphate, cacodylate,, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
分辨率 2.00 Å R-free 0.236
1MJ9 Crystal structure of yeast Esa1(C304S) mutant complexed with Coenzyme A 提交 2002-08-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:HISTONE ACETYLTRANSFERASE DOMAIN (Residues 160-445)
突变:C304S NA SODIUM ION × 1 COA COENZYME A × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.255
1MJ9 Crystal structure of yeast Esa1(C304S) mutant complexed with Coenzyme A 提交 2002-08-27 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:HISTONE ACETYLTRANSFERASE DOMAIN (Residues 160-445)
突变:C304S NA SODIUM ION × 3 COA COENZYME A × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.255
1MJ9 Crystal structure of yeast Esa1(C304S) mutant complexed with Coenzyme A 提交 2002-08-27 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 160–435(276 aa) 片段:HISTONE ACETYLTRANSFERASE DOMAIN (Residues 160-445)
突变:C304S NA SODIUM ION × 6 COA COENZYME A × 6 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.255
1MJA Crystal structure of yeast Esa1 histone acetyltransferase domain complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.26 Å R-free 0.224
1MJA Crystal structure of yeast Esa1 histone acetyltransferase domain complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.26 Å R-free 0.224
1MJA Crystal structure of yeast Esa1 histone acetyltransferase domain complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 6 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.26 Å R-free 0.224
1MJB Crystal structure of yeast Esa1 histone acetyltransferase E338Q mutant complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) ACO ACETYL COENZYME *A × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.234
1MJB Crystal structure of yeast Esa1 histone acetyltransferase E338Q mutant complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) ACO ACETYL COENZYME *A × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.234
1MJB Crystal structure of yeast Esa1 histone acetyltransferase E338Q mutant complexed with acetyl coenzyme A 提交 2002-08-27 Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 160–435(276 aa) 片段:Histone acetyltransferase domain (Residues 160-445)
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) ACO ACETYL COENZYME *A × 6 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;sodium cacodylate, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 2.50 Å R-free 0.234
2RNZ Solution structure of the presumed chromodomain of the yeast histone acetyltransferase, Esa1 提交 2008-03-01 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 17–89(73 aa) 片段:Residues 17-89
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 6.8;295 K;压力 AMBIENT
NMR样品组成 0.1mM CHROMODOMAIN [U-99% 13C; U-99% 15N], 200mM potassium phosphate, 5mM D-DTT, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.1mM CHROMODOMAIN [U-99% 13C; U-99% 15N], 200mM potassium phosphate, 5mM D-DTT, 100% D2O | 100% D2O
分辨率未提供
2RO0 Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1 提交 2008-03-01 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1–89(89 aa) 片段:Residues 1-89
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 6.8;295 K;压力 AMBIENT
NMR样品组成 0.35mM CHROMODOMAIN [U-99% 13C; U-99% 15N], 200mM potassium phosphate, 5mM D-DTT, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR样品组成 0.35mM CHROMODOMAIN [U-99% 13C; U-99% 15N], 200mM potassium phosphate, 5mM D-DTT, 100% D2O | 100% D2O
分辨率未提供
3TO6 Crystal structure of yeast Esa1 HAT domain complexed with H4K16CoA bisubstrate inhibitor 提交 2011-09-04 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致
链 A 160–435(276 aa) 片段:UNP residues 160-435
非标准单体:是(mmCIF未提供具体位点) CMC CARBOXYMETHYL COENZYME *A × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1 M sodium cacodylate, 1.6 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
分辨率 2.10 Å R-free 0.232
3TO7 Crystal structure of yeast Esa1 HAT domain bound to coenzyme A with active site lysine acetylated 提交 2011-09-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:UNP residues 160-435
非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 1 CAD CACODYLIC ACID × 1 GOL GLYCEROL × 2 SO4 SULFATE ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1 M sodium cacodylate, 1.6 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
分辨率 1.90 Å R-free 0.226
3TO7 Crystal structure of yeast Esa1 HAT domain bound to coenzyme A with active site lysine acetylated 提交 2011-09-04 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:UNP residues 160-435
非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 3 CAD CACODYLIC ACID × 3 GOL GLYCEROL × 6 SO4 SULFATE ION × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1 M sodium cacodylate, 1.6 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
分辨率 1.90 Å R-free 0.226
3TO9 Crystal structure of yeast Esa1 E338Q HAT domain bound to coenzyme A with active site lysine acetylated 提交 2011-09-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 160–435(276 aa) 片段:UNP residues 160-435
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 1 EDO 1,2-ETHANEDIOL × 3 SO4 SULFATE ION × 2 CAD CACODYLIC ACID × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1 M sodium cacodylate, 1.6 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
分辨率 2.00 Å R-free 0.234
3TO9 Crystal structure of yeast Esa1 E338Q HAT domain bound to coenzyme A with active site lysine acetylated 提交 2011-09-04 Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 A 160–435(276 aa) 片段:UNP residues 160-435
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) COA COENZYME A × 3 EDO 1,2-ETHANEDIOL × 9 SO4 SULFATE ION × 6 CAD CACODYLIC ACID × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;0.1 M sodium cacodylate, 1.6 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
分辨率 2.00 Å R-free 0.234
5J9Q Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致
链 E 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 3.25 Å R-free 0.273
5J9Q Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致
链 A 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 3.25 Å R-free 0.273
5J9Q Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致
链 I 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 3.25 Å R-free 0.273
5J9T Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 E 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM HEPES (pH 7.5), 6% 1,6-Hexanediol, 7% PEG 8000, 5% ethylene glycol, 10mM DTT.
分辨率 2.70 Å R-free 0.219
5J9T Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM HEPES (pH 7.5), 6% 1,6-Hexanediol, 7% PEG 8000, 5% ethylene glycol, 10mM DTT.
分辨率 2.70 Å R-free 0.219
5J9T Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 I 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100mM HEPES (pH 7.5), 6% 1,6-Hexanediol, 7% PEG 8000, 5% ethylene glycol, 10mM DTT.
分辨率 2.70 Å R-free 0.219
5J9U Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 E 141–445(305 aa) 片段:UNP residues 141-445)
非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;298 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 2.95 Å R-free 0.246
5J9U Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 141–445(305 aa) 片段:UNP residues 141-445)
非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;298 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 2.95 Å R-free 0.246
5J9U Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 I 141–445(305 aa) 片段:UNP residues 141-445)
非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;298 K;100mM NaCitrate (pH 6.5), 1.79M ammonium sulfate, 5%(w/v) glycerol
分辨率 2.95 Å R-free 0.246
5J9W Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 E 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) ACO ACETYL COENZYME *A × 1 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100 mM HEPES (pH 7.5), 9% PEG 20000, 8% glycerol, 7% 2-Propanol, 10% 1,6-Hexanediol, 10 mM DTT
分辨率 2.80 Å R-free 0.271
5J9W Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100 mM HEPES (pH 7.5), 9% PEG 20000, 8% glycerol, 7% 2-Propanol, 10% 1,6-Hexanediol, 10 mM DTT
分辨率 2.80 Å R-free 0.271
5J9W Crystal structure of the NuA4 core complex 提交 2016-04-11 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 I 141–445(305 aa) 片段:UNP residues 141-445
突变:E338Q 非标准单体:是(mmCIF未提供具体位点) ACO ACETYL COENZYME *A × 1 X-RAY DIFFRACTION
X-ray结晶条件 EVAPORATION;289 K;100 mM HEPES (pH 7.5), 9% PEG 20000, 8% glycerol, 7% 2-Propanol, 10% 1,6-Hexanediol, 10 mM DTT
分辨率 2.80 Å R-free 0.271
7VVZ NuA4 bound to the nucleosome 提交 2021-11-09 Assembly 1 蛋白–DNA 异源复合物;蛋白 × 19 PDB 声明:21-meric(21) 与全部聚合物一致
链 P 1–445(445 aa)
未记录 CMC CARBOXYMETHYL COENZYME *A × 1 MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6
cryo-EM玻璃化条件 冷冻剂 NITROGEN
分辨率 8.80 Å