Current Protein Identity:Q96B97 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2BZ8 N-terminal Sh3 domain of CIN85 bound to Cbl-b peptide Deposited 2005-08-12 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 1–58(58 aa) Fragment:N-TERMINAL SH3 DOMAIN RESIDUES 1-58
Chain B 1–58(58 aa) Fragment:N-TERMINAL SH3 DOMAIN RESIDUES 1-58
Not recorded NA SODIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions pH 7.5;0.8 M NA CITRATE, 0.1 M BIS-TRIS PH 7.5, 0.2 M NACL
Resolution 2.00 Å R-free 0.271
2K6D CIN85 Sh3-C domain in complex with ubiquitin Deposited 2008-07-07 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 267–328(62 aa) Fragment:CIN85 SH3-C domain
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 6.4;298 K;Ionic strength (raw mmCIF value) 0.150;Pressure ambient
NMR sample composition 0.1 mM CIN85, 0.1 mM [U-100% 15N] ubiquitin, 50 mM sodium phosphate, 2 mM DTT, 5 mM DSS, 150 mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 0.1 mM [U-100% 15N] CIN85, 0.1 mM ubiquitiny, 50 mM sodium phosphate, 2 mM DTT, 5 mM DSS, 150 mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 1.0 mM [U-100% 13C; U-100% 15N] CIN85, 50 mM sodium phosphate, 2 mM DTT, 5 mM DSS, 150 mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
2K9G Solution structure of the third SH3 domain of the Cin85 adapter protein Deposited 2008-10-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 262–333(72 aa) Fragment:SH3 domain C, UNP residues 262-333
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 6.4;298 K;Ionic strength (raw mmCIF value) 140;Pressure ambient
NMR sample composition 1mM Cin85 SH3-C, 20mM sodium phosphate, 100mM sodium chloride, 1mM DTT, 1mM EDTA, 0.02% sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 1mM [U-98% 13C; U-98% 15N] Cin85 SH3-C, 20mM sodium phosphate, 100mM sodium chloride, 1mM DTT, 1mM EDTA, 0.02% sodium azide, 100% D2O | 100% D2O
NMR sample composition 1mM [U-99% 15N] Cin85 SH3-C, 20mM sodium phosphate, 100mM sodium chloride, 1mM DTT, 1mM EDTA, 0.02% sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 1mM [U-99% 13C; U-99% 15N] Cin85 SH3-C, 20mM sodium phosphate, 100mM sodium chloride, 1mM DTT, 1mM EDTA, 0.02% sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
2N64 NMR Structure of the C-terminal Coiled-Coil Domain of CIN85 Deposited 2015-08-11 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 594–665(72 aa) Fragment:Coiled coil domain residues 594-665
Chain B 594–665(72 aa) Fragment:Coiled coil domain residues 594-665
Chain C 594–665(72 aa) Fragment:Coiled coil domain residues 594-665
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 6.9;305 K;Pressure ambient
NMR sample composition 1-3 mM [U-13C; U-15N; U-2H] CIN85 CC-domain, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition 1-3 mM [U-13C; U-15N; U-2H] CIN85 CC-domain, 1-3 mM [U-2H] CIN85 CC-domain, 95% H2O/5% D2O | 95% H2O/5% D2O
Resolution not provided
2O2O Solution structure of domain B from human CIN85 PROTEIN Deposited 2006-11-30 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 92–168(77 aa) Fragment:CIN85_B
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 6.3;298 K;Ionic strength (raw mmCIF value) 20mM PO4, 100mM NACL, 1mM EDTA, 2mM DTT, 0.01% NAN3;Pressure AMBIENT
NMR sample composition 1MM CIN85_B U-15N PHOSPHATE BUFFER; 1MM CIN85_B U-15N,13C; 20MM PHOSPHATE BUFFER; 1MM CIN85_B U-15N,13C; 20MM PHOSPHATE BUFFER
Resolution not provided
2YDL Crystal structure of SH3C from CIN85 Deposited 2011-03-22 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 270–328(59 aa) Fragment:SH3 C, RESIDUES 270-328
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions 0.1M CITRATE PH 5.5, 2.0 M AMMONIUM SULPHATE
Resolution 2.05 Å R-free 0.252
5ABS CRYSTAL STRUCTURE OF THE C-TERMINAL COILED-COIL DOMAIN OF CIN85 IN SPACE GROUP P321 Deposited 2015-08-07 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 599–662(64 aa) Fragment:COILED-COIL DOMAIN, RESIDUES 599-662
Non-standard monomer:Yes (specific site not provided by mmCIF) ZN ZINC ION × 12 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;298 K;0.05M ZN ACETATE, 20% PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K, pH 7
Resolution 1.74 Å R-free 0.283