SASDCM8

Mo-insertase domain Cnx1E from Arabidopsis thaliana

Data type: SASBDB experimental data Status: Published Curve type: Merged Last updated: 2021-02-08T20:12:23.492874+01:00
▼

1. Samples, Components and Experimental Conditions Sample & Experiment

Sample 1 · Mo-insertase domain Cnx1E from Arabidopsis thaliana

Concentration1.65 – 12.5 Buffer / pH20 mM Hepes/KOH, 150 mM NaCl, 1 mM EDTA, 2 % (v/v) glycerol / 7.4
Experimental temperature20.0 Facility / beamlineESRF / ID14-3
Wavelength0.09919 nmExposure1.0 s × 10

Molecular Components

ComponentType / organismUniProt and ConstructOligomeric StateMolecular weight
Molybdopterin biosynthesis protein CNX1
View sequence
MSRGSMEGQGCCGGGGGKTEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIGLLATAGVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQIRDSNRAMLVAAVMQQQCKVVDLGIVRDDRKELEKVLDEAVSSGVDIILTSGGVSMGDRDFVKPLLEEKGKVYFSKVLMKPGKPLTFAEIRAKPTESMLGKTVLAFGLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRVRLRLQEPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLELPATGNVLSAGSSVSAIIVSDISAFSIDKKASLSEPGSTSGGSAWSHPQFEK
proteinArabidopsis thalianaQ390541–451dimerMolecule count 249.7 kDa

Experimental Curves

CurvePoints / columnsq rangeUncertainty qualityNegative-intensity pointsSource file
11039[3]0.0510577–4.97517 1/nmHas uncertainty columnMissing 03sasbdb/entries/m8/sasdcm8/source/SASDCM8.dat
▼

2. Measurements Reported by SASBDB Reported Results

MetricMethodValueUncertaintyUnit
dmaxP(r)15.0—nm
i0Guinier68.970.044arbitrary
i0P(r)69.920.029arbitrary
mwExperimental99.0—kDa
mwPorod105.9—kDa
porod_volumePorod180.59—nm³
rgGuinier3.640.06nm
rgP(r)3.8050.004nm

These values are reported by SASBDB; SAXSdb did not recalculate them from the experimental curve.

▼

3. Source Fits and Models Source Fits & Models

▶

4. Source File Index Source Files

▶

5. Experiment Description and Publication Experiment & Publication

▼

6. Complete Source Record Complete Source Record

The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.

Open the original SASBDB entry

Buffer and Sample Properties

Buffer name20 mM Hepes/KOH, 150 mM NaCl, 1 mM EDTA, 2 % (v/v) glycerolBuffer concentration—
pH7.4Additives—
Buffer description—
Purity measurement method—Extinction coefficient—
Absorbance—Scattering contrast—
Specific volume / dry volume— / —Mixture / deuteration— / —

Acquisition Conditions and Instrument

Measurement date2015-02-05Storage / measurement temperature4.0 / 20.0
Exposure time1.0Frames10
Wavelength0.09919Sample-to-detector distance2.864
SourceX-ray synchrotronDetectorPilatus 1M
Facility / beamlineESRF / ID14-3 · Grenoble, France
q range0.051 – 4.975Sample volume / flow rate— / —

Original SASBDB Plots

Experimental I(q)
Experimental I(q)
Experimental I(q), log-log
Experimental I(q), log-log
Guinier plot
Guinier plot
Kratky plot
Kratky plot
P(r) plot
P(r) plot

Downloadable Files

CategoryFileStatusSizeChecksumDownload and View
curvesasbdb/entries/m8/sasdcm8/source/SASDCM8.datdownloaded47081c6126e536f54a2dbb7c532b32a36aa8510f019b9f0d70abe9614c3f83018f842DownloadView source fileSource site
full_entry_zipsasbdb/entries/m8/sasdcm8/source/SASDCM8.zipdownloaded154643098688919fd829aad05eff2a1508af9274cf1077896e229c944f0ca9d60f9eacDownloadView source fileSource site
pddfsasbdb/entries/m8/sasdcm8/source/SASDCM8.outdownloaded30891ee0745f48b9794ac3303df2c4158a0adc62d5733bf6fa38e8e21dbd362005c34DownloadView source fileSource site
sascifsasbdb/entries/m8/sasdcm8/source/SASDCM8.sascifdownloaded8335837f5aba87ebb8362719bbe0ea5193a6d99f5bdd7dcda01c29c4086a71da92b8e9DownloadView source fileSource site
summarysasbdb/entries/m8/sasdcm8/source/summary.jsondownloaded78295ec2ff63b7cc01c8ce6b619b4726d0d3c7423f729c0efda719db8feed7a529e8DownloadView source fileSource site
curve:source record
{
  "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.dat",
  "role": "curve",
  "sha256": "c6126e536f54a2dbb7c532b32a36aa8510f019b9f0d70abe9614c3f83018f842",
  "size": 47081,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/intensities_files/SASDCM8.dat"
}
full_entry_zip:source record and ZIP contents (4 items)
{
  "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.zip",
  "role": "full_entry_zip",
  "sha256": "098688919fd829aad05eff2a1508af9274cf1077896e229c944f0ca9d60f9eac",
  "size": 154643,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/zip_directories/SASDCM8.zip",
  "zip_member_count": 4,
  "zip_members": [
    {
      "crc32": "1a508b5d",
      "name": "SASDCM8/experimental_data/SASDCM8.dat",
      "size": 47081
    },
    {
      "crc32": "45e30ef2",
      "name": "SASDCM8/pddf/SASDCM8.out",
      "size": 30891
    },
    {
      "crc32": "91d747f8",
      "name": "SASDCM8/SASDCM8_fit1.fit",
      "size": 44874
    },
    {
      "crc32": "7ea5c378",
      "name": "SASDCM8/SASDCM8_fit1_model1.pdb",
      "size": 541420
    }
  ],
  "zip_validation": "central_directory_readable"
}
pddf:source record
{
  "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.out",
  "role": "pddf",
  "sha256": "ee0745f48b9794ac3303df2c4158a0adc62d5733bf6fa38e8e21dbd362005c34",
  "size": 30891,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/p_of_R_files/SASDCM8.out"
}
sascif:source record
{
  "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.sascif",
  "role": "sascif",
  "sha256": "7f5aba87ebb8362719bbe0ea5193a6d99f5bdd7dcda01c29c4086a71da92b8e9",
  "size": 833583,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDCM8.sascif"
}
summary:source record
{
  "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/summary.json",
  "sha256": "5ec2ff63b7cc01c8ce6b619b4726d0d3c7423f729c0efda719db8feed7a529e8",
  "size": 7829,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDCM8/"
}

All source fields (unfiltered)

Every source field is expanded here, including empty values, list members and fields already shown above.

summary.json:159 field values
Field pathRaw value
codeSASDCM8
statusPublished
type_of_curveMerged
angular_unit1/nm
project.titleDimerization of the plant molybdenum insertase Cnx1E is required for synthesis of the molybdenum cofactor.
project.publication.titleDimerization of the plant molybdenum insertase Cnx1E is required for synthesis of the molybdenum cofactor.
project.publication.author_listKrausze J, Probst C, Curth U, Reichelt J, Saha S, Schafflick D, Heinz DW, Mendel RR, Kruse T
project.publication.journalBiochem J
project.publication.doi10.1042/BCJ20160846
project.publication.pmid27803248
project.publication.published_date2017 Jan 1
project.statusreleased
project.submitted_date2017-10-26
project.released_date2021-02-08
pddf_datahttps://www.sasbdb.org/media/p_of_R_files/SASDCM8.out
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDCM8.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_kratky_img.png
pddf_plothttps://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDCM8_pofr_img.png
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDCM8.sascif
experiment.instrument.detector.typeDectris
experiment.instrument.detector.namePilatus 1M
experiment.instrument.detector.resolution172.0
experiment.instrument.nameESRF
experiment.instrument.cityGrenoble
experiment.instrument.countryFrance
experiment.instrument.beamline_nameID14-3
experiment.instrument.beam_geometry
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourceTrue
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameMolybdopterin biosynthesis protein CNX1
experiment.sample.molecule[0].short_nameCnx1E
experiment.sample.molecule[0].sequenceMSRGSMEGQGCCGGGGGKTEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAP DPLPPYPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGA DAVVQVEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIG LLATAGVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQIRDSNRAMLVAAVMQQQCKVV DLGIVRDDRKELEKVLDEAVSSGVDIILTSGGVSMGDRDFVKPLLEEKGKVYFSKVLMKP GKPLTFAEIRAKPTESMLGKTVLAFGLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRV RLRLQEPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLEL PATGNVLSAGSSVSAIIVSDISAFSIDKKASLSEPGSTSGGSAWSHPQFEK
experiment.sample.molecule[0].organismArabidopsis thaliana
experiment.sample.molecule[0].uniprot_codeQ39054
experiment.sample.molecule[0].uniprot_range_first1
experiment.sample.molecule[0].uniprot_range_last451
experiment.sample.molecule[0].oligomerizationdimer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMEGQGCCGGGGGKTEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPP YPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGADAVVQ VEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIGLLATA GVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQIRDSNRAMLVAAVMQQQCKVVDLGIV RDDRKELEKVLDEAVSSGVDIILTSGGVSMGDRDFVKPLLEEKGKVYFSKVLMKPGKPLT FAEIRAKPTESMLGKTVLAFGLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRVRLRLQ EPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLELPATGN VLSAGSSVSAIIVSDISAFSIDKKASLSEPGSIRKEKKYDEVPGPEYKVAILTVSDTVSA GAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLG GTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRSAAGIRGSTLIINMPG NPNAVAECMEALLPALKHALKQIKGDKREKHPKHIPHAEATLPTDTWDQSYKSAYETGEK KEEAGCSCTH
experiment.sample.molecule[0].mw49.7
experiment.sample.molecule[0].total_mw99.4
experiment.sample.molecule[0].number_molecules2
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name20 mM Hepes/KOH, 150 mM NaCl, 1 mM EDTA, 2 % (v/v) glycerol
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.4
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameMo-insertase domain Cnx1E from Arabidopsis thaliana
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressBraunschweig, Germany
experiment.contributor[0].affiliation[0].full_nameBraunschweig University of Technology
experiment.contributor[0].affiliation[0].webpagehttps://www.tu-braunschweig.de/
experiment.contributor[0].contributor_nameJoern
experiment.contributor[0].contributor_surnameKrausze
experiment.contributor[0].orcidnull
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2015-02-05
experiment.storage_temperature4.0
experiment.cell_temperature20.0
experiment.exposure_time1.0
experiment.number_of_frames10
experiment.wavelength0.09919
experiment.sample_detector_distance2.864
experiment.concentration_min1.65
experiment.concentration_max12.5
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.051
experiment.s_max4.975
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDCM8_fit1_model1_img.png
fits[0].models[0].softwarePDB (Protein Data Bank)
fits[0].models[0].pdb_link[0].pdb_code5g2r
fits[0].models[0].pdb_link[0].ext_code5G2R
fits[0].models[0].pdb_link[0].ext_typepdb
fits[0].models[0].pdb_link[0].difference_with_modelderived
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modelmix
fits[0].models[0].software_version
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDCM8_fit1_model1.pdb
fits[0].models[0].model_mw97.62
fits[0].models[0].bead_radius1.9
fits[0].models[0].lognull
fits[0].models[0].symmetryC2
fits[0].models[0].commentC2 symmetry generated from crystallographic symmetry
fits[0].models[0].user247
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDCM8_fit1_fixed_fit_img.png
fits[0].softwareCRYSOL
fits[0].chi_square_value39.748
fits[0].p_value0.0
fits[0].fit_residual_plotfit4columns1144_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDCM8_fit1.fit
fits[0].fit_loghttps://www.sasbdb.org/media/fitting_files/log_files/SAXS_AB_maestro_17102600.log
fits[0].software_version2.8.2
fits[0].descriptionnull
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version4.6
i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unitarbitrary
experimental_mw99.0
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw105.9
porod_mw_errornull
pddf_i069.92
pddf_i0_error0.029
guinier_i068.97
guinier_i0_error0.044
pddf_rg3.805
pddf_rg_error0.004
guinier_rg3.64
guinier_rg_error0.06
pddf_dmax15.0
pddf_dmax_errornull
porod_volume180.59
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first23
guinier_point_last54
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDCM8_datloglog_img.png
symmetrynull
last_modified2021-02-08T20:12:23.492874+01:00
bragg_peak[]
manifest.json:36 field values
Field pathRaw value
codeSASDCM8
statussuccess
started_at2026-08-11T15:56:11.895168+00:00
finished_at2026-08-11T15:56:20.649101+00:00
source_last_modified2021-02-08T20:12:23.492874+01:00
files[0].statusdownloaded
files[0].urlhttps://www.sasbdb.org/rest-api/entry/summary/SASDCM8/
files[0].path/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/summary.json
files[0].size7829
files[0].sha2565ec2ff63b7cc01c8ce6b619b4726d0d3c7423f729c0efda719db8feed7a529e8
files[1].statusdownloaded
files[1].urlhttps://www.sasbdb.org/media/intensities_files/SASDCM8.dat
files[1].path/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.dat
files[1].size47081
files[1].sha256c6126e536f54a2dbb7c532b32a36aa8510f019b9f0d70abe9614c3f83018f842
files[1].rolecurve
files[2].statusdownloaded
files[2].urlhttps://www.sasbdb.org/media/p_of_R_files/SASDCM8.out
files[2].path/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.out
files[2].size30891
files[2].sha256ee0745f48b9794ac3303df2c4158a0adc62d5733bf6fa38e8e21dbd362005c34
files[2].rolepddf
files[3].statusdownloaded
files[3].urlhttps://www.sasbdb.org/media/sascif/sascif_files/SASDCM8.sascif
files[3].path/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.sascif
files[3].size833583
files[3].sha2567f5aba87ebb8362719bbe0ea5193a6d99f5bdd7dcda01c29c4086a71da92b8e9
files[3].rolesascif
files[4].statusdownloaded
files[4].urlhttps://www.sasbdb.org/media/zip_directories/SASDCM8.zip
files[4].path/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.zip
files[4].size154643
files[4].sha256098688919fd829aad05eff2a1508af9274cf1077896e229c944f0ca9d60f9eac
files[4].rolefull_entry_zip
files[4].zip_member_count4
files[4].zip_validationcentral_directory_readable
View the complete summary.json source
{
  "code": "SASDCM8",
  "status": "Published",
  "type_of_curve": "Merged",
  "angular_unit": "1/nm",
  "project": {
    "title": "Dimerization of the plant molybdenum insertase Cnx1E is required for synthesis of the molybdenum cofactor.",
    "publication": {
      "title": "Dimerization of the plant molybdenum insertase Cnx1E is required for synthesis of the molybdenum cofactor.",
      "author_list": "Krausze J, Probst C, Curth U, Reichelt J, Saha S, Schafflick D, Heinz DW, Mendel RR, Kruse T",
      "journal": "Biochem J",
      "doi": "10.1042/BCJ20160846",
      "pmid": "27803248",
      "published_date": "2017 Jan 1"
    },
    "status": "released",
    "submitted_date": "2017-10-26",
    "released_date": "2021-02-08"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDCM8.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDCM8.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDCM8_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCM8_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDCM8.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": "Dectris",
        "name": "Pilatus 1M",
        "resolution": 172.0
      },
      "name": "ESRF",
      "city": "Grenoble",
      "country": "France",
      "beamline_name": "ID14-3",
      "beam_geometry": "",
      "type_of_source": "X-ray synchrotron",
      "point_source": true,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Molybdopterin biosynthesis protein CNX1",
          "short_name": "Cnx1E",
          "sequence": "MSRGSMEGQGCCGGGGGKTEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAP\r\nDPLPPYPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGA\r\nDAVVQVEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIG\r\nLLATAGVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQIRDSNRAMLVAAVMQQQCKVV\r\nDLGIVRDDRKELEKVLDEAVSSGVDIILTSGGVSMGDRDFVKPLLEEKGKVYFSKVLMKP\r\nGKPLTFAEIRAKPTESMLGKTVLAFGLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRV\r\nRLRLQEPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLEL\r\nPATGNVLSAGSSVSAIIVSDISAFSIDKKASLSEPGSTSGGSAWSHPQFEK",
          "organism": "Arabidopsis thaliana",
          "uniprot_code": "Q39054",
          "uniprot_range_first": 1,
          "uniprot_range_last": 451,
          "oligomerization": "dimer",
          "molecular_type": "protein",
          "uniprot_sequence": "MEGQGCCGGGGGKTEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPP\nYPASVKDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGADAVVQ\nVEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIGLLATA\nGVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQIRDSNRAMLVAAVMQQQCKVVDLGIV\nRDDRKELEKVLDEAVSSGVDIILTSGGVSMGDRDFVKPLLEEKGKVYFSKVLMKPGKPLT\nFAEIRAKPTESMLGKTVLAFGLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRVRLRLQ\nEPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLELPATGN\nVLSAGSSVSAIIVSDISAFSIDKKASLSEPGSIRKEKKYDEVPGPEYKVAILTVSDTVSA\nGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLG\nGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRSAAGIRGSTLIINMPG\nNPNAVAECMEALLPALKHALKQIKGDKREKHPKHIPHAEATLPTDTWDQSYKSAYETGEK\nKEEAGCSCTH",
          "mw": 49.7,
          "total_mw": 99.4,
          "number_molecules": 2,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "20 mM Hepes/KOH, 150 mM NaCl, 1 mM EDTA, 2 % (v/v) glycerol",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 7.4,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Mo-insertase domain Cnx1E from Arabidopsis thaliana",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": null,
            "address": "Braunschweig, Germany",
            "full_name": "Braunschweig University of Technology",
            "webpage": "https://www.tu-braunschweig.de/"
          }
        ],
        "contributor_name": "Joern",
        "contributor_surname": "Krausze",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2015-02-05",
    "storage_temperature": 4.0,
    "cell_temperature": 20.0,
    "exposure_time": 1.0,
    "number_of_frames": 10,
    "wavelength": 0.09919,
    "sample_detector_distance": 2.864,
    "concentration_min": 1.65,
    "concentration_max": 12.5,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.051,
    "s_max": 4.975,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDCM8_fit1_model1_img.png",
          "software": "PDB (Protein Data Bank)",
          "pdb_link": [
            {
              "pdb_code": "5g2r",
              "ext_code": "5G2R",
              "ext_type": "pdb",
              "difference_with_model": "derived"
            }
          ],
          "model_title": null,
          "type_of_model": "mix",
          "software_version": "",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDCM8_fit1_model1.pdb",
          "model_mw": 97.62,
          "bead_radius": 1.9,
          "log": null,
          "symmetry": "C2",
          "comment": "C2 symmetry generated from crystallographic symmetry",
          "user": 247
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDCM8_fit1_fixed_fit_img.png",
      "software": "CRYSOL",
      "chi_square_value": 39.748,
      "p_value": 0.0,
      "fit_residual_plot": "fit4columns1144_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDCM8_fit1.fit",
      "fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/SAXS_AB_maestro_17102600.log",
      "software_version": "2.8.2",
      "description": null
    }
  ],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "4.6",
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": null,
  "tags": [],
  "intensity_unit": "arbitrary",
  "experimental_mw": 99.0,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 105.9,
  "porod_mw_error": null,
  "pddf_i0": 69.92,
  "pddf_i0_error": 0.029,
  "guinier_i0": 68.97,
  "guinier_i0_error": 0.044,
  "pddf_rg": 3.805,
  "pddf_rg_error": 0.004,
  "guinier_rg": 3.64,
  "guinier_rg_error": 0.06,
  "pddf_dmax": 15.0,
  "pddf_dmax_error": null,
  "porod_volume": 180.59,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 23,
  "guinier_point_last": 54,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDCM8_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2021-02-08T20:12:23.492874+01:00",
  "bragg_peak": []
}
View the complete manifest.json source
{
  "code": "SASDCM8",
  "status": "success",
  "started_at": "2026-08-11T15:56:11.895168+00:00",
  "finished_at": "2026-08-11T15:56:20.649101+00:00",
  "source_last_modified": "2021-02-08T20:12:23.492874+01:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDCM8/",
      "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/summary.json",
      "size": 7829,
      "sha256": "5ec2ff63b7cc01c8ce6b619b4726d0d3c7423f729c0efda719db8feed7a529e8"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDCM8.dat",
      "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.dat",
      "size": 47081,
      "sha256": "c6126e536f54a2dbb7c532b32a36aa8510f019b9f0d70abe9614c3f83018f842",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDCM8.out",
      "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.out",
      "size": 30891,
      "sha256": "ee0745f48b9794ac3303df2c4158a0adc62d5733bf6fa38e8e21dbd362005c34",
      "role": "pddf"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDCM8.sascif",
      "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.sascif",
      "size": 833583,
      "sha256": "7f5aba87ebb8362719bbe0ea5193a6d99f5bdd7dcda01c29c4086a71da92b8e9",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDCM8.zip",
      "path": "/data/saxsdb/sasbdb/entries/m8/sasdcm8/source/SASDCM8.zip",
      "size": 154643,
      "sha256": "098688919fd829aad05eff2a1508af9274cf1077896e229c944f0ca9d60f9eac",
      "role": "full_entry_zip",
      "zip_member_count": 4,
      "zip_validation": "central_directory_readable"
    }
  ]
}