G61V FLAVODOXIN MUTANT FROM DESULFOVIBRIO VULGARIS

Method: X-RAY DIFFRACTION D_max: 48.4 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1azl
deposition_date	1997-11-18
title	G61V FLAVODOXIN MUTANT FROM DESULFOVIBRIO VULGARIS
keywords	ELECTRON TRANSPORT, ELECTRON TRANSFER, FLAVOPROTEIN, FMN, FLAVODOXIN, MUTANT; ELECTRON TRANSPORT
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	15.62 Å
rg_electron	14.12 Å
i0	5530850.00
molecular_weight	16172.0 kDa
excluded_volume	19849 Å³
envelope_volume	22119 Å³
shell_volume	13132 Å³
envelope_diameter	47.6 Å
shell_rg	20.14 Å
envelope_rg	14.41 Å
shape_rg	14.14 Å
total_rg	15.17 Å
total_atoms	1138
n_residues	147
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	48.4 Å
rg_real	15.50 Å
rg_real_error	0.20 Å
i0_real	5.5310e+06
i0_real_error	6.1740e+04
rg_reciprocal	15.51 Å
i0_reciprocal	5531000.0000
total_estimate	0.8953
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	20.8 Å
skewness	0.074
kurtosis	-0.417
angular_range	— – 0.5000 Å⁻¹
current_alpha	0.0000
highest_alpha	941700.0000
n_real_points	80
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.893; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.967

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

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6. Citations (5)

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length_a	56.490 Å
length_b	88.140 Å
length_c	35.190 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 2
int_tables_number	18
crystal_system	—

resolution	1.800 Å
resolution_low	10.000 Å
r_factor	—
r_work	0.1750
r_free	—

description	FLAVODOXIN
formula_weight	15746.2 kDa
mutation	G61V
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	1264

G61V FLAVODOXIN MUTANT FROM DESULFOVIBRIO VULGARIS

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

Entity 3 water

6. Citations (5)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
ncbi_taxonomy_id	882
host_organism	Escherichia coli

description	FLAVIN MONONUCLEOTIDE
formula_weight	456.3 kDa
src_method	syn
entity_count	1

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	126

fit	/app/data/saxs_computation/az/1azl/1azl.fit
pddf	/app/data/pr_computation/az/1azl/1azl.pr.out
profile	/app/data/saxs_computation/az/1azl/1azl.dat