TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 V20A

Method: X-RAY DIFFRACTION D_max: 39.4 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1b7j
deposition_date	1999-01-24
title	TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 V20A
keywords	ANTIFREEZE PROTEIN, MUTANT, ICE BINDING PROTEIN, THERMAL HYSTERESIS PROTEIN; ANTIFREEZE PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	11.76 Å
rg_electron	10.52 Å
i0	1032750.00
molecular_weight	6903.0 kDa
excluded_volume	8747 Å³
envelope_volume	9126 Å³
shell_volume	7690 Å³
envelope_diameter	37.7 Å
shell_rg	15.78 Å
envelope_rg	10.82 Å
shape_rg	10.53 Å
total_rg	11.94 Å
total_atoms	480
n_residues	66
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	39.4 Å
rg_real	11.68 Å
rg_real_error	0.27 Å
i0_real	1.0330e+06
i0_real_error	1.0840e+04
rg_reciprocal	11.69 Å
i0_reciprocal	1033000.0000
total_estimate	0.8600
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	15.5 Å
skewness	0.148
kurtosis	-0.178
angular_range	— – 0.5000 Å⁻¹
current_alpha	0.0000
highest_alpha	240500.0000
n_real_points	80
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.735; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.970

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (6)

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length_a	33.166 Å
length_b	40.055 Å
length_c	44.745 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	1.650 Å
resolution_low	8.000 Å
r_factor	—
r_work	0.1944
r_free	0.2150

description	PROTEIN (ANTIFREEZE PROTEIN TYPE III)
formula_weight	6951.2 kDa
mutation	V20A, P64A, P65A
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	531

TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 V20A

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (6)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Macrozoarces americanus
common_name	ocean pout
ncbi_taxonomy_id	8199
host_organism	Escherichia coli

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	51

fit	/app/data/saxs_computation/b7/1b7j/1b7j.fit
pddf	/app/data/pr_computation/b7/1b7j/1b7j.pr.out
profile	/app/data/saxs_computation/b7/1b7j/1b7j.dat